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The map label for this gene is hpcR [H]

Identifier: 89055996

GI number: 89055996

Start: 3560763

End: 3561200

Strand: Direct

Name: hpcR [H]

Synonym: Jann_3505

Alternate gene names: 89055996

Gene position: 3560763-3561200 (Clockwise)

Preceding gene: 89055988

Following gene: 89056002

Centisome position: 82.46

GC content: 60.96

Gene sequence:

>438_bases
ATGTCCCGCAAATTTCCCCCGACCGCGCGCTCGTTGCCAATGGCGCTGATCCGCGCACGCGAAGGCGTTATGGCACCGAT
CCGCGACATGCTGTCAGAAACCGGAATTACCGAACAGCAATGGCGCGTTCTGCGGGTGTTGTCCGAGAACGGGCCGTTGG
ATGCCACATCCCTTGCCGACCGCGCGAGCCTTCTGTTCCCCAGTCTGACCCGCATCGCCACGAAGATGCGTGACAAAGGG
TTGATCACCCAGACCCGCGACGAGGTGGACCGCCGCCGGCATTTCATTGCGATCACGGAAGACGGGCAAAAGATCATCGA
CGACCGCGCGGATCAATCGGCGCAGATCGTGGCGGATATTCGGGCGACACTCGGCGAGGACGATTACGAAACACTGCTGG
ACTTGCTGGCAAAACTTGACCCCGGGTCACGGGACTAA

Upstream 100 bases:

>100_bases
CTTAACGCGATAATAGTTGCGATGTTAAATAAATCGACCTTGTATTGTCAAGCGCGTCTTGGCAGCACGGGAGCATAAGA
AGACCAGTCCGAGGCGCCGC

Downstream 100 bases:

>100_bases
GCCCTCGGCACACCACTGGTCAAAGATCGTAAGGGCGGTGTCGGCAAAGAGCGCGTCGTTGATATGGGCGTCGATTGCAT
GCGCTTGGACGTTGGCTGGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSRKFPPTARSLPMALIRAREGVMAPIRDMLSETGITEQQWRVLRVLSENGPLDATSLADRASLLFPSLTRIATKMRDKG
LITQTRDEVDRRRHFIAITEDGQKIIDDRADQSAQIVADIRATLGEDDYETLLDLLAKLDPGSRD

Sequences:

>Translated_145_residues
MSRKFPPTARSLPMALIRAREGVMAPIRDMLSETGITEQQWRVLRVLSENGPLDATSLADRASLLFPSLTRIATKMRDKG
LITQTRDEVDRRRHFIAITEDGQKIIDDRADQSAQIVADIRATLGEDDYETLLDLLAKLDPGSRD
>Mature_144_residues
SRKFPPTARSLPMALIRAREGVMAPIRDMLSETGITEQQWRVLRVLSENGPLDATSLADRASLLFPSLTRIATKMRDKGL
ITQTRDEVDRRRHFIAITEDGQKIIDDRADQSAQIVADIRATLGEDDYETLLDLLAKLDPGSRD

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16290; Mature: 16159

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKFPPTARSLPMALIRAREGVMAPIRDMLSETGITEQQWRVLRVLSENGPLDATSLAD
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHH
RASLLFPSLTRIATKMRDKGLITQTRDEVDRRRHFIAITEDGQKIIDDRADQSAQIVADI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHCCCHHHHHHHH
RATLGEDDYETLLDLLAKLDPGSRD
HHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRKFPPTARSLPMALIRAREGVMAPIRDMLSETGITEQQWRVLRVLSENGPLDATSLAD
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHH
RASLLFPSLTRIATKMRDKGLITQTRDEVDRRRHFIAITEDGQKIIDDRADQSAQIVADI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHCCCHHHHHHHH
RATLGEDDYETLLDLLAKLDPGSRD
HHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]