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The map label for this gene is ydeP [H]

Identifier: 89055975

GI number: 89055975

Start: 3537053

End: 3537382

Strand: Direct

Name: ydeP [H]

Synonym: Jann_3484

Alternate gene names: 89055975

Gene position: 3537053-3537382 (Clockwise)

Preceding gene: 89055963

Following gene: 89055981

Centisome position: 81.91

GC content: 59.7

Gene sequence:

>330_bases
ATGCCAACACCCTCCTGCCCCGTTCATGCCAGCATCCTGGCCATTGGCGGAAAGTGGAAGCCTTGCATCCTCTACCGCCT
GCAAAACGGGACGTTCCGCTTCAGCGAGTTAAGACGGCAAATGCCCTGGATCTCGGAAAAGGTCCTGATCCGTCAGCTCA
AGGAACTGGAGAAGGACGGAATCGTGGTCCGGACGGATTATGGCGAGGTGCCACCGCGTGTGGATTATGCGTTGAGCGAT
TACGGCGCGACTGTCGGACCTCTCATGGAGACGATGGCGGCATGGGGTGAACAGCACCTGAAACAGCCGCGCCGGAGGGA
CGCGGAGTGA

Upstream 100 bases:

>100_bases
CGCTGCAAAACACCGATCCAGATGTTAACTTTGGCGCGATTCAGCATTTGGGCAAGTACTGACATTTTTGTCAGTAGACC
AATTGAGAAGGATACCGCCG

Downstream 100 bases:

>100_bases
TCGCATTTCAGGCTTTGCAAAGGCCCCTCGCCGCAGGTGGACGTGCCGCACGATCACAGTCTTGCGGGTCGGTCTTCATT
AGATCGCAGCGATCATCCGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPTPSCPVHASILAIGGKWKPCILYRLQNGTFRFSELRRQMPWISEKVLIRQLKELEKDGIVVRTDYGEVPPRVDYALSD
YGATVGPLMETMAAWGEQHLKQPRRRDAE

Sequences:

>Translated_109_residues
MPTPSCPVHASILAIGGKWKPCILYRLQNGTFRFSELRRQMPWISEKVLIRQLKELEKDGIVVRTDYGEVPPRVDYALSD
YGATVGPLMETMAAWGEQHLKQPRRRDAE
>Mature_108_residues
PTPSCPVHASILAIGGKWKPCILYRLQNGTFRFSELRRQMPWISEKVLIRQLKELEKDGIVVRTDYGEVPPRVDYALSDY
GATVGPLMETMAAWGEQHLKQPRRRDAE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=95, Percent_Identity=38.9473684210526, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12497; Mature: 12365

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPSCPVHASILAIGGKWKPCILYRLQNGTFRFSELRRQMPWISEKVLIRQLKELEKDG
CCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCC
IVVRTDYGEVPPRVDYALSDYGATVGPLMETMAAWGEQHLKQPRRRDAE
EEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure 
PTPSCPVHASILAIGGKWKPCILYRLQNGTFRFSELRRQMPWISEKVLIRQLKELEKDG
CCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCC
IVVRTDYGEVPPRVDYALSDYGATVGPLMETMAAWGEQHLKQPRRRDAE
EEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]