| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yghU [H]
Identifier: 89055959
GI number: 89055959
Start: 3521808
End: 3522680
Strand: Direct
Name: yghU [H]
Synonym: Jann_3468
Alternate gene names: 89055959
Gene position: 3521808-3522680 (Clockwise)
Preceding gene: 89055958
Following gene: 89055960
Centisome position: 81.56
GC content: 62.43
Gene sequence:
>873_bases ATGGCACGACAGGAAGAATACACGCCCCCGAAAGTCTGGACCTGGGACGCGGAGAATGGCGGGGCCTGGGCGTCGCTCAA CCGCCCCATCGCGGGGGCCACCCACGACAAGGACCTGCCCGTGGGCGAGCATCCGTTCCAGCTCTACTCCCTTGGCACGC CCAATGGCGTGAAGGTGACCGTTCTGTTTGAAGAGATGCTGGAGGCGGGCATTTCAGAGGCCGAATATGACGCCTGGCTG ATCAGGATCGGGGATGGCGACCAGTTCGGCAGCGGGTTCGTGGAGGCCAACCCGAACTCCAAGATCCCCGCGATGTGGGA CCGCTCCGGCCCCAAGCCCGTCCGGGTGTTCGAAAGCGTCGCGATCATGATGCATCTGGCCGAGAAATTCGACGCCTTCT TGGGGCCTGCGTCGGCGCGGGCCGAATTGCTGTCCTGGCTGATGTGGCAGATGGGCAGCGCGCCGTTTTTGGGCGGCGGC TTCGGGCATTTCTACGCCTATGCCCCCTACCCGATGGAATATCCGATCAACCGCTATGCGATGGAAACCAAGCGGCAGAT GGATGTGCTGGACAAGCATCTGGCGGAGAATGAATGGATGGTGGGCGGTGAATACACCATCGCCGACATGGCGATCTGGC CGTGGTACGGGCGCACGGTGATGGGCGAGAGCTATGACGCCGGAGAGTTCCTGAGCGTGCATGAGTACAAGCACTTGCTG GCCTGGGCCGAGCGCATTGATGCACGCCCCGGCGCGACACGGGGACGGATGGTCAACAAGACCTCCGGCGATCCGGCTGA GCAATTGTGGGAACGGCATTCAGCGGACGATTTTCTGACCAAGACCCAGGACAAGATCGGTGACGCGTCCTGA
Upstream 100 bases:
>100_bases CCGCTCCCCGGAGTTTTAGGGCCAAGATGAAAGAGCGGGCGCATCGGGCTTGGGTTTCGTCTGGATTGGCCTAGGTTTGC GACATTCACAGGAGATGAGC
Downstream 100 bases:
>100_bases CAGGTGGCGGCGGGAGCAGTCCCGGCCCAGGGCAAGGTGAGCTTCGTGGCGACAGATGACGAGATTGCCGTCGCGCTGCT GGATCTGGCGGCGCGGCGCG
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MARQEEYTPPKVWTWDAENGGAWASLNRPIAGATHDKDLPVGEHPFQLYSLGTPNGVKVTVLFEEMLEAGISEAEYDAWL IRIGDGDQFGSGFVEANPNSKIPAMWDRSGPKPVRVFESVAIMMHLAEKFDAFLGPASARAELLSWLMWQMGSAPFLGGG FGHFYAYAPYPMEYPINRYAMETKRQMDVLDKHLAENEWMVGGEYTIADMAIWPWYGRTVMGESYDAGEFLSVHEYKHLL AWAERIDARPGATRGRMVNKTSGDPAEQLWERHSADDFLTKTQDKIGDAS
Sequences:
>Translated_290_residues MARQEEYTPPKVWTWDAENGGAWASLNRPIAGATHDKDLPVGEHPFQLYSLGTPNGVKVTVLFEEMLEAGISEAEYDAWL IRIGDGDQFGSGFVEANPNSKIPAMWDRSGPKPVRVFESVAIMMHLAEKFDAFLGPASARAELLSWLMWQMGSAPFLGGG FGHFYAYAPYPMEYPINRYAMETKRQMDVLDKHLAENEWMVGGEYTIADMAIWPWYGRTVMGESYDAGEFLSVHEYKHLL AWAERIDARPGATRGRMVNKTSGDPAEQLWERHSADDFLTKTQDKIGDAS >Mature_289_residues ARQEEYTPPKVWTWDAENGGAWASLNRPIAGATHDKDLPVGEHPFQLYSLGTPNGVKVTVLFEEMLEAGISEAEYDAWLI RIGDGDQFGSGFVEANPNSKIPAMWDRSGPKPVRVFESVAIMMHLAEKFDAFLGPASARAELLSWLMWQMGSAPFLGGGF GHFYAYAPYPMEYPINRYAMETKRQMDVLDKHLAENEWMVGGEYTIADMAIWPWYGRTVMGESYDAGEFLSVHEYKHLLA WAERIDARPGATRGRMVNKTSGDPAEQLWERHSADDFLTKTQDKIGDAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=280, Percent_Identity=61.7857142857143, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1788640, Length=221, Percent_Identity=37.5565610859729, Blast_Score=129, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324100, Length=217, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32594; Mature: 32463
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQEEYTPPKVWTWDAENGGAWASLNRPIAGATHDKDLPVGEHPFQLYSLGTPNGVKVT CCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE VLFEEMLEAGISEAEYDAWLIRIGDGDQFGSGFVEANPNSKIPAMWDRSGPKPVRVFESV EEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHH AIMMHLAEKFDAFLGPASARAELLSWLMWQMGSAPFLGGGFGHFYAYAPYPMEYPINRYA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCHHHH METKRQMDVLDKHLAENEWMVGGEYTIADMAIWPWYGRTVMGESYDAGEFLSVHEYKHLL HHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHH AWAERIDARPGATRGRMVNKTSGDPAEQLWERHSADDFLTKTQDKIGDAS HHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ARQEEYTPPKVWTWDAENGGAWASLNRPIAGATHDKDLPVGEHPFQLYSLGTPNGVKVT CCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE VLFEEMLEAGISEAEYDAWLIRIGDGDQFGSGFVEANPNSKIPAMWDRSGPKPVRVFESV EEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHH AIMMHLAEKFDAFLGPASARAELLSWLMWQMGSAPFLGGGFGHFYAYAPYPMEYPINRYA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCHHHH METKRQMDVLDKHLAENEWMVGGEYTIADMAIWPWYGRTVMGESYDAGEFLSVHEYKHLL HHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHH AWAERIDARPGATRGRMVNKTSGDPAEQLWERHSADDFLTKTQDKIGDAS HHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]