Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055934

Identifier: 89055934

GI number: 89055934

Start: 3489317

End: 3489868

Strand: Direct

Name: 89055934

Synonym: Jann_3443

Alternate gene names: NA

Gene position: 3489317-3489868 (Clockwise)

Preceding gene: 89055933

Following gene: 89055936

Centisome position: 80.81

GC content: 57.07

Gene sequence:

>552_bases
GTGAAACTCCTGATCCAAAAATTCCTTCGCGATACATCGGCAGCGGTCTCTCTTGAGACGGTCATTATCTTTCCCATTCT
GATCTGGGCGTGGATCGGTACCTTCGCGTTCTTCGATGCGTATCGGGTCTACAACACCTCGATCAAGGCGACCTTCACGA
TTGCGGACCTGATCTCTCGCCAGCAGAAATCAGAACGTGTCGAGGAAGACGACCTTGATGGCATGTCCGAGATGCTGGCG
CTGATGGTGCGCGGCACCGATGGGGTGGAGATGCGCGTGACCCAGATCCAGCGCCTGGTATCCGGCGGATATTGCGTCAA
CTACAGCTATGGCACCGGATCGCAAGCCCGTCTGTTCAACGCGAACCTCCCCGCAATGCAGGACCGCATCCCCGATATGG
CGACCGGCGAATATGTGGTGCTGGTCGAAAGTTTCATCGACTATGCCCCGTCGTTCAACGTGGGCCTGAACGACCTGACG
TTTGAGAACTTCACACTGACACGCCCCCGCAATGGCCAGGTCCCCTTCCCCGGCAGAGGCTGTGAATTGTAG

Upstream 100 bases:

>100_bases
CCGGCTTCGGCCTCAACCTGACGCGCGACGATAGCGGAGGCATGCATATGATGGCCTCTACGATTTTCGTGAACGAACCG
TCCGAAGGGAGCGAATTGCA

Downstream 100 bases:

>100_bases
GTCGGCGGCCATCAATCAGCCCTTGGAACCGCCCTCGCGCGTGTCCAGCTGACCAGTTTGGTCTGTCTGGGCAGGCCATC
CGCGGATCAGCCAGCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISRQQKSERVEEDDLDGMSEMLA
LMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFNANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLT
FENFTLTRPRNGQVPFPGRGCEL

Sequences:

>Translated_183_residues
MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISRQQKSERVEEDDLDGMSEMLA
LMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFNANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLT
FENFTLTRPRNGQVPFPGRGCEL
>Mature_183_residues
MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISRQQKSERVEEDDLDGMSEMLA
LMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFNANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLT
FENFTLTRPRNGQVPFPGRGCEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20593; Mature: 20593

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
QQKSERVEEDDLDGMSEMLALMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFN
HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE
ANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLTFENFTLTRPRNGQVPFPGRG
CCCCHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCCCCCCCC
CEL
CCC
>Mature Secondary Structure
MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
QQKSERVEEDDLDGMSEMLALMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFN
HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE
ANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLTFENFTLTRPRNGQVPFPGRG
CCCCHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCCCCCCCC
CEL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA