| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055934
Identifier: 89055934
GI number: 89055934
Start: 3489317
End: 3489868
Strand: Direct
Name: 89055934
Synonym: Jann_3443
Alternate gene names: NA
Gene position: 3489317-3489868 (Clockwise)
Preceding gene: 89055933
Following gene: 89055936
Centisome position: 80.81
GC content: 57.07
Gene sequence:
>552_bases GTGAAACTCCTGATCCAAAAATTCCTTCGCGATACATCGGCAGCGGTCTCTCTTGAGACGGTCATTATCTTTCCCATTCT GATCTGGGCGTGGATCGGTACCTTCGCGTTCTTCGATGCGTATCGGGTCTACAACACCTCGATCAAGGCGACCTTCACGA TTGCGGACCTGATCTCTCGCCAGCAGAAATCAGAACGTGTCGAGGAAGACGACCTTGATGGCATGTCCGAGATGCTGGCG CTGATGGTGCGCGGCACCGATGGGGTGGAGATGCGCGTGACCCAGATCCAGCGCCTGGTATCCGGCGGATATTGCGTCAA CTACAGCTATGGCACCGGATCGCAAGCCCGTCTGTTCAACGCGAACCTCCCCGCAATGCAGGACCGCATCCCCGATATGG CGACCGGCGAATATGTGGTGCTGGTCGAAAGTTTCATCGACTATGCCCCGTCGTTCAACGTGGGCCTGAACGACCTGACG TTTGAGAACTTCACACTGACACGCCCCCGCAATGGCCAGGTCCCCTTCCCCGGCAGAGGCTGTGAATTGTAG
Upstream 100 bases:
>100_bases CCGGCTTCGGCCTCAACCTGACGCGCGACGATAGCGGAGGCATGCATATGATGGCCTCTACGATTTTCGTGAACGAACCG TCCGAAGGGAGCGAATTGCA
Downstream 100 bases:
>100_bases GTCGGCGGCCATCAATCAGCCCTTGGAACCGCCCTCGCGCGTGTCCAGCTGACCAGTTTGGTCTGTCTGGGCAGGCCATC CGCGGATCAGCCAGCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISRQQKSERVEEDDLDGMSEMLA LMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFNANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLT FENFTLTRPRNGQVPFPGRGCEL
Sequences:
>Translated_183_residues MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISRQQKSERVEEDDLDGMSEMLA LMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFNANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLT FENFTLTRPRNGQVPFPGRGCEL >Mature_183_residues MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISRQQKSERVEEDDLDGMSEMLA LMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFNANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLT FENFTLTRPRNGQVPFPGRGCEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20593; Mature: 20593
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH QQKSERVEEDDLDGMSEMLALMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFN HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE ANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLTFENFTLTRPRNGQVPFPGRG CCCCHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCCCCCCCC CEL CCC >Mature Secondary Structure MKLLIQKFLRDTSAAVSLETVIIFPILIWAWIGTFAFFDAYRVYNTSIKATFTIADLISR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH QQKSERVEEDDLDGMSEMLALMVRGTDGVEMRVTQIQRLVSGGYCVNYSYGTGSQARLFN HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE ANLPAMQDRIPDMATGEYVVLVESFIDYAPSFNVGLNDLTFENFTLTRPRNGQVPFPGRG CCCCHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCCCCCCCC CEL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA