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The map label for this gene is sdpR [H]

Identifier: 89055898

GI number: 89055898

Start: 3457348

End: 3457680

Strand: Direct

Name: sdpR [H]

Synonym: Jann_3407

Alternate gene names: 89055898

Gene position: 3457348-3457680 (Clockwise)

Preceding gene: 89055896

Following gene: 89055899

Centisome position: 80.07

GC content: 62.76

Gene sequence:

>333_bases
ATGGTATCACAAATGCCCCCAGATCCGCAGTCCACGTTCAAAGCCCTGGCCGACCCGACGCGGCGCGATATCCTCGCCCT
GCTTGGCAGCCGCGACATGAGCATCGGCGATGTGGCGTCCCATTTCGATATGACGCGCCCCGCCGTCAAGAAACACCTCG
CGGTCCTCGCGCAGGGGCAGCTGATCACCGTCACCCCCAAGGGGCGGGAGCGGATCAATGCCATCAACCCCGACGGGTTT
CGTGCGATGGAAAGCTGGCTCAGCACCTTCGACAGGTTCTGGGATGACCGCCTCGCCGCCCTCAAATCAGCCGTAGAAAA
GGATGCGCCATGA

Upstream 100 bases:

>100_bases
GGATGGGGTGTCTCGCATCTGGCAAACATGAACAATAGGTGAACAAAAATCAAGCCACTTGACATGATACTAAAAGGTTT
CATAAATTATGTGAAACCAA

Downstream 100 bases:

>100_bases
CCTCCCACACCATCGAGAAGACCCTGATCCTTGCCGCCCCGCCGGATCAGGTCTGGTCGTTCCTGACGCAGCCCGAAAAG
CTCGCGATCTGGTTTCACCG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVSQMPPDPQSTFKALADPTRRDILALLGSRDMSIGDVASHFDMTRPAVKKHLAVLAQGQLITVTPKGRERINAINPDGF
RAMESWLSTFDRFWDDRLAALKSAVEKDAP

Sequences:

>Translated_110_residues
MVSQMPPDPQSTFKALADPTRRDILALLGSRDMSIGDVASHFDMTRPAVKKHLAVLAQGQLITVTPKGRERINAINPDGF
RAMESWLSTFDRFWDDRLAALKSAVEKDAP
>Mature_110_residues
MVSQMPPDPQSTFKALADPTRRDILALLGSRDMSIGDVASHFDMTRPAVKKHLAVLAQGQLITVTPKGRERINAINPDGF
RAMESWLSTFDRFWDDRLAALKSAVEKDAP

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12207; Mature: 12207

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQMPPDPQSTFKALADPTRRDILALLGSRDMSIGDVASHFDMTRPAVKKHLAVLAQGQ
CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
LITVTPKGRERINAINPDGFRAMESWLSTFDRFWDDRLAALKSAVEKDAP
EEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSQMPPDPQSTFKALADPTRRDILALLGSRDMSIGDVASHFDMTRPAVKKHLAVLAQGQ
CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
LITVTPKGRERINAINPDGFRAMESWLSTFDRFWDDRLAALKSAVEKDAP
EEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]