| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055886
Identifier: 89055886
GI number: 89055886
Start: 3448045
End: 3449280
Strand: Direct
Name: 89055886
Synonym: Jann_3395
Alternate gene names: NA
Gene position: 3448045-3449280 (Clockwise)
Preceding gene: 89055883
Following gene: 89055893
Centisome position: 79.85
GC content: 64.97
Gene sequence:
>1236_bases ATGCCGATGCAGTGCAGCCTTAGCGTGGGAGCATACGCGAAAGGGAATCTCATGCGCTTGTTCACCAAACTTCTCGGGCG CGCACTTTTGCTGGTGCTCGTGGGCCTCGCAGCCTTCCTGACCTTTGGGCCGGGCTATGTGGAGGCGGAGCGCAATGGCG TGAACTGGCAGGGCCCCTACCCCGTATCCGACGAGGCCGCAGCCCTGCACGACAGCCTTACCATTGGCGACTGGCACGCC GACAGCCTGCTATGGAACCGCGATCTGACCGAGCGTGGCGCGACGGGCCACGTCGATATTCCGCGTTTGCTGGAGGGCAA TGTGGCGGTGCAGGTGTTCACGGCCGTGACCAAATCGCCTGCGGGGCAGAATTATCACGAGAATTCGGGCGATGCGCGCG ATAACATCACGCTGTTGGCCGTGGGACAGCTTTGGCCGCCCCGGACCTGGACCAGCCTGGTCGAGCGCGCGCTCTATCAG GCCGAGCGGTTGCACGGCTTTGCCGAGGCGTCCGACGGGCTGCGGGTGATCACCTCAGCCACCGAATTGGAGGCTCTGCT GGAGGCCCGCAGTCAGGGTTTGCAGACCGTCGGCGGGATGCTGGGCATTGAAGGGGCCCATGCGCTGGAAGGGGATATCG GAAACCTCGACCGGCTTGAAGGGGCGGGATATCGGCTGATCGGATTGCACCACTTCTTCGACAATGAACTCGGCGGCTCG CTCCACGGTGTGGGCAACCAGGGCCTGACGGAGTTTGGCTACACGGTCGTGGCGGGAATCGTGGCGCGCGGCATGGTCCT CGACCTCGCCCATTCCTCCCCGCAGGTGGCCCGTGATGTGATCGCTGCCACGGACATCCCGTTGATCGTCAGCCATACCG GCCTGCGCTCCGCCTGTGACGCGCACCGCAACTTCCCCGATGACCTGATGCGAGACATCGTGGCCAACGGCGCAGACCAG GGTGGCGGCGTGATCGGGATCGGCTATTGGGCCGATGTCACCTGTGATGACAGTCCGGACGGGGTGGCGCGGGTGATCAT GGCGGCGATCGAAGCGCTTGGGGTCGATCACGTCTCCCTTGGGTCGGACTATGACGGATCGGTCACGGTTGGCTTTGATA CCTCGGAACTATCGGCCCTGACCGATGCGCTCCTGCGGGCCGGGGCGCGGGAGGATCAGATCCGCGCCGTGATGGGGGGC AACATGCTGCGGGTCCTGCGGGCGCGGCTGGACTAG
Upstream 100 bases:
>100_bases ATGCGGCGCACCATGGCAGTCCCTTCCGTTAATCTTGGGAAAAGTTAGCTTCGCGCGGACACCCGGCAAGAGACCCGCCG CCGCGCGAGGTCACGCTTGC
Downstream 100 bases:
>100_bases AGGCCAGTGCGGCGGGCGCGGATTGACCGCCCCCACCTCGCGCACCCCCTTGAAACCGAGGGGTTGCAAGGTTGCAACCA GGAATTAAGTCTTTGCAAAG
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPMQCSLSVGAYAKGNLMRLFTKLLGRALLLVLVGLAAFLTFGPGYVEAERNGVNWQGPYPVSDEAAALHDSLTIGDWHA DSLLWNRDLTERGATGHVDIPRLLEGNVAVQVFTAVTKSPAGQNYHENSGDARDNITLLAVGQLWPPRTWTSLVERALYQ AERLHGFAEASDGLRVITSATELEALLEARSQGLQTVGGMLGIEGAHALEGDIGNLDRLEGAGYRLIGLHHFFDNELGGS LHGVGNQGLTEFGYTVVAGIVARGMVLDLAHSSPQVARDVIAATDIPLIVSHTGLRSACDAHRNFPDDLMRDIVANGADQ GGGVIGIGYWADVTCDDSPDGVARVIMAAIEALGVDHVSLGSDYDGSVTVGFDTSELSALTDALLRAGAREDQIRAVMGG NMLRVLRARLD
Sequences:
>Translated_411_residues MPMQCSLSVGAYAKGNLMRLFTKLLGRALLLVLVGLAAFLTFGPGYVEAERNGVNWQGPYPVSDEAAALHDSLTIGDWHA DSLLWNRDLTERGATGHVDIPRLLEGNVAVQVFTAVTKSPAGQNYHENSGDARDNITLLAVGQLWPPRTWTSLVERALYQ AERLHGFAEASDGLRVITSATELEALLEARSQGLQTVGGMLGIEGAHALEGDIGNLDRLEGAGYRLIGLHHFFDNELGGS LHGVGNQGLTEFGYTVVAGIVARGMVLDLAHSSPQVARDVIAATDIPLIVSHTGLRSACDAHRNFPDDLMRDIVANGADQ GGGVIGIGYWADVTCDDSPDGVARVIMAAIEALGVDHVSLGSDYDGSVTVGFDTSELSALTDALLRAGAREDQIRAVMGG NMLRVLRARLD >Mature_410_residues PMQCSLSVGAYAKGNLMRLFTKLLGRALLLVLVGLAAFLTFGPGYVEAERNGVNWQGPYPVSDEAAALHDSLTIGDWHAD SLLWNRDLTERGATGHVDIPRLLEGNVAVQVFTAVTKSPAGQNYHENSGDARDNITLLAVGQLWPPRTWTSLVERALYQA ERLHGFAEASDGLRVITSATELEALLEARSQGLQTVGGMLGIEGAHALEGDIGNLDRLEGAGYRLIGLHHFFDNELGGSL HGVGNQGLTEFGYTVVAGIVARGMVLDLAHSSPQVARDVIAATDIPLIVSHTGLRSACDAHRNFPDDLMRDIVANGADQG GGVIGIGYWADVTCDDSPDGVARVIMAAIEALGVDHVSLGSDYDGSVTVGFDTSELSALTDALLRAGAREDQIRAVMGGN MLRVLRARLD
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=248, Percent_Identity=32.6612903225806, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI193211608, Length=278, Percent_Identity=28.0575539568345, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI193211610, Length=278, Percent_Identity=28.0575539568345, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI189458885, Length=352, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI4758190, Length=352, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI161083233, Length=328, Percent_Identity=28.9634146341463, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI221475880, Length=352, Percent_Identity=26.7045454545455, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI281362638, Length=334, Percent_Identity=27.5449101796407, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI281362636, Length=334, Percent_Identity=27.5449101796407, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 43656; Mature: 43525
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQCSLSVGAYAKGNLMRLFTKLLGRALLLVLVGLAAFLTFGPGYVEAERNGVNWQGPY CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC PVSDEAAALHDSLTIGDWHADSLLWNRDLTERGATGHVDIPRLLEGNVAVQVFTAVTKSP CCCCCHHHHHCCCEECCCCCCHHEECCCHHHCCCCCCCCCHHHHCCCCEEEEEEHHHCCC AGQNYHENSGDARDNITLLAVGQLWPPRTWTSLVERALYQAERLHGFAEASDGLRVITSA CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH TELEALLEARSQGLQTVGGMLGIEGAHALEGDIGNLDRLEGAGYRLIGLHHFFDNELGGS HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHCCCCEEEEEEHHHHCCCCCCC LHGVGNQGLTEFGYTVVAGIVARGMVLDLAHSSPQVARDVIAATDIPLIVSHTGLRSACD CCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHH AHRNFPDDLMRDIVANGADQGGGVIGIGYWADVTCDDSPDGVARVIMAAIEALGVDHVSL HHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEC GSDYDGSVTVGFDTSELSALTDALLRAGAREDQIRAVMGGNMLRVLRARLD CCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure PMQCSLSVGAYAKGNLMRLFTKLLGRALLLVLVGLAAFLTFGPGYVEAERNGVNWQGPY CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC PVSDEAAALHDSLTIGDWHADSLLWNRDLTERGATGHVDIPRLLEGNVAVQVFTAVTKSP CCCCCHHHHHCCCEECCCCCCHHEECCCHHHCCCCCCCCCHHHHCCCCEEEEEEHHHCCC AGQNYHENSGDARDNITLLAVGQLWPPRTWTSLVERALYQAERLHGFAEASDGLRVITSA CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH TELEALLEARSQGLQTVGGMLGIEGAHALEGDIGNLDRLEGAGYRLIGLHHFFDNELGGS HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHCCCCEEEEEEHHHHCCCCCCC LHGVGNQGLTEFGYTVVAGIVARGMVLDLAHSSPQVARDVIAATDIPLIVSHTGLRSACD CCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHH AHRNFPDDLMRDIVANGADQGGGVIGIGYWADVTCDDSPDGVARVIMAAIEALGVDHVSL HHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEC GSDYDGSVTVGFDTSELSALTDALLRAGAREDQIRAVMGGNMLRVLRARLD CCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]