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The map label for this gene is yfbS [C]

Identifier: 89055872

GI number: 89055872

Start: 3434088

End: 3435863

Strand: Direct

Name: yfbS [C]

Synonym: Jann_3381

Alternate gene names: 89055872

Gene position: 3434088-3435863 (Clockwise)

Preceding gene: 89055868

Following gene: 89055878

Centisome position: 79.53

GC content: 64.47

Gene sequence:

>1776_bases
ATGACACCCGATCAAATCATCCTCTTCTCTCTTTTTGGCGCGGTCTTTGGCCTGCTTCTCTGGGGTCGTTTCCGCTATGA
TCTTGTGGCGTTCTCTGCCCTCATGGTGGGCACGGTTCTGGGCGTTGTGCCCACATCGGACGCCTTCGCGGGCTTCGGCC
ACCCCGCCGTTCTGGTGGTGGCGCTGGTCCTTGTTGTCTCGGCAGGTCTGGTGCGATCCGGCGCGGTGTTCCTGATCACC
CGCACGCTGGTGGACGCGTCACGGTCCCTCGGCGCGCATATCACGATCATGGGGGCCATTGGCGGCGCTCTCTCGGCATT
CATGAACAACGTGGCCGCGCTGGCGCTGCTGATGCCCGTCGATATCGCAACGGCGCGCAAGGCGGGTCGCGCGCCGGGCG
TGTCGCTGATGCCGCTGTCATTCTGCACAATCCTGGGCGGCATGGTCACGCTGATCGGCACGCCACCCAATATCATCATC
GCCACGATCCGGGAGGATCAGTTGGGTGAGCCCTTTCGCATGTTTGATTTTGCCCCCGTCGGCGGGGTGGCCGCCATTGC
GGGTCTGGCTTTCGTCGCGCTGATCGGTTGGCGGCTCATCCCGGTACGTGATAGCGGCGTTGGCGGCGACCAGCTAAAAG
CGCTTGCGCCATATCTCGCAGAATTGCGCGTGCCTGAAGGCTCCAAACTCGACGGCACCCGCCTGCGCGATCTGCAAGCG
GGCGCAGAGGAGGCTGACGTCGCCATCCTCGGCATCCTGCGCGACGGCAAACGCCGCTTTGGGACAGGCCGCAACCTGAC
ATTGCGCGAAGGGGACGTGCTGGTGCTGGAGGCCGCGCCGGAGGCCTTGGACGAATTCCGCGTGGGCCAGAATTTGGAGA
CGGCCGGCAGCGACACAGCCACCGAAAACGCCACCGGCGACGGCGTCTCTTTCATCGAGATGGTTGTGCCCGACGATGCC
CGCATCGCAGGCAAGACCGTCGAAAGCGTGGGCCTTGCCTGGCGTCACCGCACCACGTTGATGGGGATTGCGCGCAAGGG
CACGCGGATCACCAAGCGGCTGCGCAAGACCTTGGTGCAGCCGGGTGATATCCTGCTGCTGCTGGCCCCCAGCGACAGCG
CCGATGATGTCGTCAGCTGGCTTGGCGGCCTCACGCTTGCGGATCGGGGTCTGACGGTCACGAACGACAGCAAGACCTGG
GCGGCCATCGGCCTTTTTGCTGCCGCCGTCCTCGCCGCGTCTCTGGGCATCGTCTACCTGCCCATCGCGCTTGGCATCGT
CGCGGTGGGCTATGTGCTGCTGAAAATCCTGCCCATTGCGGAGATTTACGACCACATCGAATGGCCGGTCGTGGTCCTGC
TGGGGTCGATGATCCCCCTTGGCGCGGCGCTCGACAGTTCCGGCGGGACCGAGCTGATCGCGAATTCCCTCGTAGCCCTC
ACGGATGGTCTGCCAGCCTGGGCGATCCTGACCGTGCTGATGGTCGTCACCATGACGATGTCGGATGTCCTCAACAACAC
TGCCACGGCCATTGTTGCGGCACCGGTGGGCATCACCATGGCGCAGTCCCTGGGTGTGTCGCCGGATCCGTTTCTGATGA
CCGTCGCTGTCGCCGCGTCGGCCGCGTTCCTCACGCCGATTGGCCACAAGAACAACACGCTGATCCTGGGGCCGGGCGGC
TACGGCTTCGGCGATTACTGGCGCATGGGCCTGCCGTTGGAGGTCATCGTGGTTGCCGTTTCCATCCCCACGATCCTGCT
GGTCTGGCCCCTTTGA

Upstream 100 bases:

>100_bases
TCGGCACACGGGCAGGCCCCGACTGGTCCGCAGCTGTCACCGCATCTCATGGGCAAACATCCCGCTTACCCGCACGTCGC
GCGTGCGATAGGCTCTCCCA

Downstream 100 bases:

>100_bases
CCAGCGCGTTCAGTCGAATTGCGACGGGGGCGGTGAGGTGAAGGTCCAGGTGTTGCCCGCGGGTCCGTCGATCTCAACGG
TCGCAATGGGCGAGAGTTGC

Product: TrkA-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MTPDQIILFSLFGAVFGLLLWGRFRYDLVAFSALMVGTVLGVVPTSDAFAGFGHPAVLVVALVLVVSAGLVRSGAVFLIT
RTLVDASRSLGAHITIMGAIGGALSAFMNNVAALALLMPVDIATARKAGRAPGVSLMPLSFCTILGGMVTLIGTPPNIII
ATIREDQLGEPFRMFDFAPVGGVAAIAGLAFVALIGWRLIPVRDSGVGGDQLKALAPYLAELRVPEGSKLDGTRLRDLQA
GAEEADVAILGILRDGKRRFGTGRNLTLREGDVLVLEAAPEALDEFRVGQNLETAGSDTATENATGDGVSFIEMVVPDDA
RIAGKTVESVGLAWRHRTTLMGIARKGTRITKRLRKTLVQPGDILLLLAPSDSADDVVSWLGGLTLADRGLTVTNDSKTW
AAIGLFAAAVLAASLGIVYLPIALGIVAVGYVLLKILPIAEIYDHIEWPVVVLLGSMIPLGAALDSSGGTELIANSLVAL
TDGLPAWAILTVLMVVTMTMSDVLNNTATAIVAAPVGITMAQSLGVSPDPFLMTVAVAASAAFLTPIGHKNNTLILGPGG
YGFGDYWRMGLPLEVIVVAVSIPTILLVWPL

Sequences:

>Translated_591_residues
MTPDQIILFSLFGAVFGLLLWGRFRYDLVAFSALMVGTVLGVVPTSDAFAGFGHPAVLVVALVLVVSAGLVRSGAVFLIT
RTLVDASRSLGAHITIMGAIGGALSAFMNNVAALALLMPVDIATARKAGRAPGVSLMPLSFCTILGGMVTLIGTPPNIII
ATIREDQLGEPFRMFDFAPVGGVAAIAGLAFVALIGWRLIPVRDSGVGGDQLKALAPYLAELRVPEGSKLDGTRLRDLQA
GAEEADVAILGILRDGKRRFGTGRNLTLREGDVLVLEAAPEALDEFRVGQNLETAGSDTATENATGDGVSFIEMVVPDDA
RIAGKTVESVGLAWRHRTTLMGIARKGTRITKRLRKTLVQPGDILLLLAPSDSADDVVSWLGGLTLADRGLTVTNDSKTW
AAIGLFAAAVLAASLGIVYLPIALGIVAVGYVLLKILPIAEIYDHIEWPVVVLLGSMIPLGAALDSSGGTELIANSLVAL
TDGLPAWAILTVLMVVTMTMSDVLNNTATAIVAAPVGITMAQSLGVSPDPFLMTVAVAASAAFLTPIGHKNNTLILGPGG
YGFGDYWRMGLPLEVIVVAVSIPTILLVWPL
>Mature_590_residues
TPDQIILFSLFGAVFGLLLWGRFRYDLVAFSALMVGTVLGVVPTSDAFAGFGHPAVLVVALVLVVSAGLVRSGAVFLITR
TLVDASRSLGAHITIMGAIGGALSAFMNNVAALALLMPVDIATARKAGRAPGVSLMPLSFCTILGGMVTLIGTPPNIIIA
TIREDQLGEPFRMFDFAPVGGVAAIAGLAFVALIGWRLIPVRDSGVGGDQLKALAPYLAELRVPEGSKLDGTRLRDLQAG
AEEADVAILGILRDGKRRFGTGRNLTLREGDVLVLEAAPEALDEFRVGQNLETAGSDTATENATGDGVSFIEMVVPDDAR
IAGKTVESVGLAWRHRTTLMGIARKGTRITKRLRKTLVQPGDILLLLAPSDSADDVVSWLGGLTLADRGLTVTNDSKTWA
AIGLFAAAVLAASLGIVYLPIALGIVAVGYVLLKILPIAEIYDHIEWPVVVLLGSMIPLGAALDSSGGTELIANSLVALT
DGLPAWAILTVLMVVTMTMSDVLNNTATAIVAAPVGITMAQSLGVSPDPFLMTVAVAASAAFLTPIGHKNNTLILGPGGY
GFGDYWRMGLPLEVIVVAVSIPTILLVWPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=625, Percent_Identity=28.16, Blast_Score=198, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI32565804, Length=139, Percent_Identity=32.3741007194245, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71988385, Length=139, Percent_Identity=32.3741007194245, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 61588; Mature: 61457

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDQIILFSLFGAVFGLLLWGRFRYDLVAFSALMVGTVLGVVPTSDAFAGFGHPAVLVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
ALVLVVSAGLVRSGAVFLITRTLVDASRSLGAHITIMGAIGGALSAFMNNVAALALLMPV
HHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
DIATARKAGRAPGVSLMPLSFCTILGGMVTLIGTPPNIIIATIREDQLGEPFRMFDFAPV
HHHHHHHCCCCCCCEEHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCHHHHCCCCC
GGVAAIAGLAFVALIGWRLIPVRDSGVGGDQLKALAPYLAELRVPEGSKLDGTRLRDLQA
CHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC
GAEEADVAILGILRDGKRRFGTGRNLTLREGDVLVLEAAPEALDEFRVGQNLETAGSDTA
CCCCCCEEEEEEECCCHHHCCCCCCEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCCCC
TENATGDGVSFIEMVVPDDARIAGKTVESVGLAWRHRTTLMGIARKGTRITKRLRKTLVQ
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PGDILLLLAPSDSADDVVSWLGGLTLADRGLTVTNDSKTWAAIGLFAAAVLAASLGIVYL
CCCEEEEECCCCCHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
PIALGIVAVGYVLLKILPIAEIYDHIEWPVVVLLGSMIPLGAALDSSGGTELIANSLVAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
TDGLPAWAILTVLMVVTMTMSDVLNNTATAIVAAPVGITMAQSLGVSPDPFLMTVAVAAS
HCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHCCCCCCHHHHHHHHHHH
AAFLTPIGHKNNTLILGPGGYGFGDYWRMGLPLEVIVVAVSIPTILLVWPL
HHHCCCCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCEEEEEECC
>Mature Secondary Structure 
TPDQIILFSLFGAVFGLLLWGRFRYDLVAFSALMVGTVLGVVPTSDAFAGFGHPAVLVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
ALVLVVSAGLVRSGAVFLITRTLVDASRSLGAHITIMGAIGGALSAFMNNVAALALLMPV
HHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
DIATARKAGRAPGVSLMPLSFCTILGGMVTLIGTPPNIIIATIREDQLGEPFRMFDFAPV
HHHHHHHCCCCCCCEEHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCHHHHCCCCC
GGVAAIAGLAFVALIGWRLIPVRDSGVGGDQLKALAPYLAELRVPEGSKLDGTRLRDLQA
CHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC
GAEEADVAILGILRDGKRRFGTGRNLTLREGDVLVLEAAPEALDEFRVGQNLETAGSDTA
CCCCCCEEEEEEECCCHHHCCCCCCEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCCCC
TENATGDGVSFIEMVVPDDARIAGKTVESVGLAWRHRTTLMGIARKGTRITKRLRKTLVQ
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PGDILLLLAPSDSADDVVSWLGGLTLADRGLTVTNDSKTWAAIGLFAAAVLAASLGIVYL
CCCEEEEECCCCCHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
PIALGIVAVGYVLLKILPIAEIYDHIEWPVVVLLGSMIPLGAALDSSGGTELIANSLVAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
TDGLPAWAILTVLMVVTMTMSDVLNNTATAIVAAPVGITMAQSLGVSPDPFLMTVAVAAS
HCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHCCCCCCHHHHHHHHHHH
AAFLTPIGHKNNTLILGPGGYGFGDYWRMGLPLEVIVVAVSIPTILLVWPL
HHHCCCCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]