Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055820

Identifier: 89055820

GI number: 89055820

Start: 3380797

End: 3381213

Strand: Direct

Name: 89055820

Synonym: Jann_3329

Alternate gene names: NA

Gene position: 3380797-3381213 (Clockwise)

Preceding gene: 89055816

Following gene: 89055824

Centisome position: 78.3

GC content: 66.67

Gene sequence:

>417_bases
ATGATTGCCTATGTCACCGTCGGTGCCGACGACATAGCCTGCGCCAAACGCTTCTACCGCGCGTTTCTGCCTGCCCTGGG
CTACGGCCTGACGGAAGGGGCGGAGGGCCTGAGCTTCACGCTTCCGGTGGCGCCGGGGCAAACGCCCGTGCTGCCGGACT
TCTACGTCAAACCGACCTTCGATGGGCGTCCGGCCTCGGCTGGGAACGGGTCCATGGTGGCGTTTGAGGCGCGCAGTCAG
GCACAGGTCCGCGATTTGCACGCCGCAGCCCTTGCAGCGGGCGGAAGGGACGAGGGCCAGCCGGGGTTCCGCGCCGCCTA
CGGGCCGCACTTTTATGTCGGCTACCTGCGTGACCCGCAGGGCAACAAGATTGCGCTCTTCTCCAGCGATGCCAGCGAAC
CGGGACGGGATGGGTAA

Upstream 100 bases:

>100_bases
GGCCTGGATCGGGGCGCACGCGTTGCGCCGCCGCATCCGGTGGCTGTCACGGGTCGGGTAAAGCCGCTAGATTGGCCAAA
AGATCGGGGAGAACGACAAA

Downstream 100 bases:

>100_bases
GGCTGTGGGCCATAGACTGGGTGCCTTGGACGGGATTGTGGCGCGCAGAGCTAGCGCCGTCCCCTAAGCCCGTCCGTAGC
CTTCAGAGATCGCCACCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase Protein; Dioxygenase; Lactoylglutathione Lyase-Like Lyase; Isocitrate Dehydrogenase; Glyoxalase Family Protein Family Protein; Lactoylgluthathione Lyase; Dioxygenase-Family Protein; Glyoxylase Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTFDGRPASAGNGSMVAFEARSQ
AQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQGNKIALFSSDASEPGRDG

Sequences:

>Translated_138_residues
MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTFDGRPASAGNGSMVAFEARSQ
AQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQGNKIALFSSDASEPGRDG
>Mature_138_residues
MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTFDGRPASAGNGSMVAFEARSQ
AQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQGNKIALFSSDASEPGRDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14503; Mature: 14503

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTF
CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCC
DGRPASAGNGSMVAFEARSQAQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQ
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEEECCC
GNKIALFSSDASEPGRDG
CCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTF
CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCC
DGRPASAGNGSMVAFEARSQAQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQ
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEEECCC
GNKIALFSSDASEPGRDG
CCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA