| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055820
Identifier: 89055820
GI number: 89055820
Start: 3380797
End: 3381213
Strand: Direct
Name: 89055820
Synonym: Jann_3329
Alternate gene names: NA
Gene position: 3380797-3381213 (Clockwise)
Preceding gene: 89055816
Following gene: 89055824
Centisome position: 78.3
GC content: 66.67
Gene sequence:
>417_bases ATGATTGCCTATGTCACCGTCGGTGCCGACGACATAGCCTGCGCCAAACGCTTCTACCGCGCGTTTCTGCCTGCCCTGGG CTACGGCCTGACGGAAGGGGCGGAGGGCCTGAGCTTCACGCTTCCGGTGGCGCCGGGGCAAACGCCCGTGCTGCCGGACT TCTACGTCAAACCGACCTTCGATGGGCGTCCGGCCTCGGCTGGGAACGGGTCCATGGTGGCGTTTGAGGCGCGCAGTCAG GCACAGGTCCGCGATTTGCACGCCGCAGCCCTTGCAGCGGGCGGAAGGGACGAGGGCCAGCCGGGGTTCCGCGCCGCCTA CGGGCCGCACTTTTATGTCGGCTACCTGCGTGACCCGCAGGGCAACAAGATTGCGCTCTTCTCCAGCGATGCCAGCGAAC CGGGACGGGATGGGTAA
Upstream 100 bases:
>100_bases GGCCTGGATCGGGGCGCACGCGTTGCGCCGCCGCATCCGGTGGCTGTCACGGGTCGGGTAAAGCCGCTAGATTGGCCAAA AGATCGGGGAGAACGACAAA
Downstream 100 bases:
>100_bases GGCTGTGGGCCATAGACTGGGTGCCTTGGACGGGATTGTGGCGCGCAGAGCTAGCGCCGTCCCCTAAGCCCGTCCGTAGC CTTCAGAGATCGCCACCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase Protein; Dioxygenase; Lactoylglutathione Lyase-Like Lyase; Isocitrate Dehydrogenase; Glyoxalase Family Protein Family Protein; Lactoylgluthathione Lyase; Dioxygenase-Family Protein; Glyoxylase Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTFDGRPASAGNGSMVAFEARSQ AQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQGNKIALFSSDASEPGRDG
Sequences:
>Translated_138_residues MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTFDGRPASAGNGSMVAFEARSQ AQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQGNKIALFSSDASEPGRDG >Mature_138_residues MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTFDGRPASAGNGSMVAFEARSQ AQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQGNKIALFSSDASEPGRDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14503; Mature: 14503
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTF CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCC DGRPASAGNGSMVAFEARSQAQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQ CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEEECCC GNKIALFSSDASEPGRDG CCEEEEEECCCCCCCCCC >Mature Secondary Structure MIAYVTVGADDIACAKRFYRAFLPALGYGLTEGAEGLSFTLPVAPGQTPVLPDFYVKPTF CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCC DGRPASAGNGSMVAFEARSQAQVRDLHAAALAAGGRDEGQPGFRAAYGPHFYVGYLRDPQ CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEEECCC GNKIALFSSDASEPGRDG CCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA