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The map label for this gene is tdk [H]

Identifier: 89055815

GI number: 89055815

Start: 3377122

End: 3377736

Strand: Direct

Name: tdk [H]

Synonym: Jann_3324

Alternate gene names: 89055815

Gene position: 3377122-3377736 (Clockwise)

Preceding gene: 89055812

Following gene: 89055816

Centisome position: 78.21

GC content: 63.09

Gene sequence:

>615_bases
ATGGCCCACTTGCGGCAAAACCCGCCCATGGCCAAGCTCTATTTCAACTACTCCACCATGAATGCGGGCAAATCGACCCT
GCTGTTGCAAGCCTCCTACAATTATATCGAACGGGGGATGCAGACCTATCTGCTGACCGCGAATTTCGATGATCGTGCGG
GCATGGGACGGATCGGGTCGCGCATCGGGATCGAGGCGGAGGCCGATACCTACACCCAATCCGATGATCTGTTTGCCAAG
ATTGACGCGCGGCTGAAGGCCGGCCCCTGCGCCTGCGTGCTGGTGGATGAGGCCCAATGGATGACCCGCGATCAGGTCTG
GCAACTGGCCCGTGCCGTGGATGATCTGGGCGTGCCGGTGATGTGCTACGGGCTGCGGGTGGATTTCCGCGGAGAGCTGT
TCCCCGGCTCCGCCGCCCTTCTGGCGCTGGCCGATGAGATGCGGGAGGTGCGCACGATCTGCCATTGCGGGCGCAAGGCC
ACGATGGTGATCCGCGTGGGCGAAGATGGCAACGCCCTGGCCGAAGGCGCGCAGATCGAGGTTGGCGGCAACGACCGCTA
TATCAGCCTGTGCCGCAAGCATTTCCGCGAAGCCGTGGGCGACGTCCCCGTCTGA

Upstream 100 bases:

>100_bases
ATCCGCGCGCTGTCATGCTGTCCGTGTCGCTCATCGGGTAAAATCCTTTGTCTGCACCCAGCAAAGCCGCTTTGTCATGG
GCCGTCAACGTCTTGCCAGT

Downstream 100 bases:

>100_bases
CCCTTCCGATCCACGCCACCGCACCCCATATGTCGGATATGGATCTCGCCCCGATACAAACCGGTTTCCCCGAGGATCAA
CGCCACGCCGCGGCCAAGCT

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MAHLRQNPPMAKLYFNYSTMNAGKSTLLLQASYNYIERGMQTYLLTANFDDRAGMGRIGSRIGIEAEADTYTQSDDLFAK
IDARLKAGPCACVLVDEAQWMTRDQVWQLARAVDDLGVPVMCYGLRVDFRGELFPGSAALLALADEMREVRTICHCGRKA
TMVIRVGEDGNALAEGAQIEVGGNDRYISLCRKHFREAVGDVPV

Sequences:

>Translated_204_residues
MAHLRQNPPMAKLYFNYSTMNAGKSTLLLQASYNYIERGMQTYLLTANFDDRAGMGRIGSRIGIEAEADTYTQSDDLFAK
IDARLKAGPCACVLVDEAQWMTRDQVWQLARAVDDLGVPVMCYGLRVDFRGELFPGSAALLALADEMREVRTICHCGRKA
TMVIRVGEDGNALAEGAQIEVGGNDRYISLCRKHFREAVGDVPV
>Mature_203_residues
AHLRQNPPMAKLYFNYSTMNAGKSTLLLQASYNYIERGMQTYLLTANFDDRAGMGRIGSRIGIEAEADTYTQSDDLFAKI
DARLKAGPCACVLVDEAQWMTRDQVWQLARAVDDLGVPVMCYGLRVDFRGELFPGSAALLALADEMREVRTICHCGRKAT
MVIRVGEDGNALAEGAQIEVGGNDRYISLCRKHFREAVGDVPV

Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1787490, Length=190, Percent_Identity=55.7894736842105, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020633
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 22576; Mature: 22445

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00603 TK_CELLULAR_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLRQNPPMAKLYFNYSTMNAGKSTLLLQASYNYIERGMQTYLLTANFDDRAGMGRIGS
CCCCCCCCCEEEEEEEEEECCCCCEEEEEEECHHHHHCCCEEEEEEECCCCCCCCCCCCC
RIGIEAEADTYTQSDDLFAKIDARLKAGPCACVLVDEAQWMTRDQVWQLARAVDDLGVPV
CCCCEECCCCCCCCCCCEEEEECEECCCCEEEEEECCCHHCCHHHHHHHHHHHHHCCCCE
MCYGLRVDFRGELFPGSAALLALADEMREVRTICHCGRKATMVIRVGEDGNALAEGAQIE
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCEEE
VGGNDRYISLCRKHFREAVGDVPV
ECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AHLRQNPPMAKLYFNYSTMNAGKSTLLLQASYNYIERGMQTYLLTANFDDRAGMGRIGS
CCCCCCCCEEEEEEEEEECCCCCEEEEEEECHHHHHCCCEEEEEEECCCCCCCCCCCCC
RIGIEAEADTYTQSDDLFAKIDARLKAGPCACVLVDEAQWMTRDQVWQLARAVDDLGVPV
CCCCEECCCCCCCCCCCEEEEECEECCCCEEEEEECCCHHCCHHHHHHHHHHHHHCCCCE
MCYGLRVDFRGELFPGSAALLALADEMREVRTICHCGRKATMVIRVGEDGNALAEGAQIE
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCEEE
VGGNDRYISLCRKHFREAVGDVPV
ECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA