Click here to switch to the map view.

The map label for this gene is 89055707

Identifier: 89055707

GI number: 89055707

Start: 3259545

End: 3260702

Strand: Direct

Name: 89055707

Synonym: Jann_3216

Alternate gene names: NA

Gene position: 3259545-3260702 (Clockwise)

Preceding gene: 89055706

Following gene: 89055708

Centisome position: 75.49

GC content: 57.25

Gene sequence:

>1158_bases
ATGGGCGGAAAGTGGATGAGGTGGATGGCTCCTGCGCCACCGGCATCAAACGTGCCAAAGTGCAGTTGTCATCGACTGCT
AGGAAAGGAGCCACCCAATGACAGTAAAGACTGTAGGCCTGGATCACTGACCGGCAGGGCATTGTTTAGCGATGTCCCGA
GAGGGATGGCCAAGGACGTTTTTCAAGTGCACTGCGTTTCAGCCACGGGGCGCAGAGTCATTAACAAGAAGATCAAACGC
GCCAAGTTGCTGGCGTTCCTTGAGACACTTCCGCGCTGTGTTGTGGGCATGGAGGCCTGCGGATCAGCGCATCACTGGGG
CGGTGAGCTGCGTAAGCTAGGTCATGATGTTCGCCTCATGCCTGCCGCCTATGTCAAACTCTATGTGAAGCGTGGCAAGA
CCGATGCTGCTGATGCGGAAGCGATCTGTGAAGCTGTGCGCCGCCAGTCGATGCGGTTTGTCGAGATCGAGTCAGAGGAT
CAGCAGGCAGTGCTTGCCATCCACAGCGCCCGGGATCTGGTCGTGCGTCAGCGTACCCAAGTCGTAAACATGATCCGCAG
CATCCTTCGGGAGTTTGGACACATCCTGCCGACGGGCATTGAGGCTGTATCCAAGTTTGCCCGAGAACACGGCACTGAAG
ACCAATTGGACATGCCCGAGATCGCGGACGGCATTCTCGGCGTGATGTGTCATCAGCTGAATGGCCTCAATGCGCGAGTT
GATGGGCTGACAAAACTGATCGAACAACACGCATGGCTGGATGCCGATGCACGACGTCTGATGCGCATGCCCGGGATCGG
ACCGATCACGGCCTCAGCCATCGTCGCAACAATTGGTGATGCGAAACAGTTTGAGACCGGGCGCGACTTAGCTACGTGGC
TGGGTCTGACGCCGCTCAACAAATCCAGCGGCGGCAAGGAACGTCTCGGGCGCATCATAAAGAAGGGCGACAGATACATT
CGAAAGCTCTTGATCATCGGAATGACCTCACGTTCCCTCATGGCCAAGAACAAGCCCGAGAAGGCGGACACCTGGACCGC
CAAGCTGCCCGACGAACAGCCCTTCCGGCTGGCGACGGTCGCCATGGCGAACAAATCTGCCCGGATCATTTGGGCATTGT
TGACGAAACGAGAGGAATACCGGCAGCCGATCGTTTGA

Upstream 100 bases:

>100_bases
TCCTGCGCCGCAGCAGACGCGCAAAGCCTGATGAGAGGGGCGCTTGCGCACCAATTTTAAGATCTCTTTCTGCGCCAGCA
ACACGTTGCTTTTCAACAGA

Downstream 100 bases:

>100_bases
TCCTGCCACGAGATGCAAGACGCTTGATGTGACGATGCGAAACGAAGTCAACCAAGAGTAAGGACACTCCGACCAATGTC
GCGGCTCCAGAGGTCGTATA

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MGGKWMRWMAPAPPASNVPKCSCHRLLGKEPPNDSKDCRPGSLTGRALFSDVPRGMAKDVFQVHCVSATGRRVINKKIKR
AKLLAFLETLPRCVVGMEACGSAHHWGGELRKLGHDVRLMPAAYVKLYVKRGKTDAADAEAICEAVRRQSMRFVEIESED
QQAVLAIHSARDLVVRQRTQVVNMIRSILREFGHILPTGIEAVSKFAREHGTEDQLDMPEIADGILGVMCHQLNGLNARV
DGLTKLIEQHAWLDADARRLMRMPGIGPITASAIVATIGDAKQFETGRDLATWLGLTPLNKSSGGKERLGRIIKKGDRYI
RKLLIIGMTSRSLMAKNKPEKADTWTAKLPDEQPFRLATVAMANKSARIIWALLTKREEYRQPIV

Sequences:

>Translated_385_residues
MGGKWMRWMAPAPPASNVPKCSCHRLLGKEPPNDSKDCRPGSLTGRALFSDVPRGMAKDVFQVHCVSATGRRVINKKIKR
AKLLAFLETLPRCVVGMEACGSAHHWGGELRKLGHDVRLMPAAYVKLYVKRGKTDAADAEAICEAVRRQSMRFVEIESED
QQAVLAIHSARDLVVRQRTQVVNMIRSILREFGHILPTGIEAVSKFAREHGTEDQLDMPEIADGILGVMCHQLNGLNARV
DGLTKLIEQHAWLDADARRLMRMPGIGPITASAIVATIGDAKQFETGRDLATWLGLTPLNKSSGGKERLGRIIKKGDRYI
RKLLIIGMTSRSLMAKNKPEKADTWTAKLPDEQPFRLATVAMANKSARIIWALLTKREEYRQPIV
>Mature_384_residues
GGKWMRWMAPAPPASNVPKCSCHRLLGKEPPNDSKDCRPGSLTGRALFSDVPRGMAKDVFQVHCVSATGRRVINKKIKRA
KLLAFLETLPRCVVGMEACGSAHHWGGELRKLGHDVRLMPAAYVKLYVKRGKTDAADAEAICEAVRRQSMRFVEIESEDQ
QAVLAIHSARDLVVRQRTQVVNMIRSILREFGHILPTGIEAVSKFAREHGTEDQLDMPEIADGILGVMCHQLNGLNARVD
GLTKLIEQHAWLDADARRLMRMPGIGPITASAIVATIGDAKQFETGRDLATWLGLTPLNKSSGGKERLGRIIKKGDRYIR
KLLIIGMTSRSLMAKNKPEKADTWTAKLPDEQPFRLATVAMANKSARIIWALLTKREEYRQPIV

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42778; Mature: 42646

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGKWMRWMAPAPPASNVPKCSCHRLLGKEPPNDSKDCRPGSLTGRALFSDVPRGMAKDV
CCCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
FQVHCVSATGRRVINKKIKRAKLLAFLETLPRCVVGMEACGSAHHWGGELRKLGHDVRLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCEEH
PAAYVKLYVKRGKTDAADAEAICEAVRRQSMRFVEIESEDQQAVLAIHSARDLVVRQRTQ
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VVNMIRSILREFGHILPTGIEAVSKFAREHGTEDQLDMPEIADGILGVMCHQLNGLNARV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
DGLTKLIEQHAWLDADARRLMRMPGIGPITASAIVATIGDAKQFETGRDLATWLGLTPLN
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCC
KSSGGKERLGRIIKKGDRYIRKLLIIGMTSRSLMAKNKPEKADTWTAKLPDEQPFRLATV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHH
AMANKSARIIWALLTKREEYRQPIV
HHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GGKWMRWMAPAPPASNVPKCSCHRLLGKEPPNDSKDCRPGSLTGRALFSDVPRGMAKDV
CCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
FQVHCVSATGRRVINKKIKRAKLLAFLETLPRCVVGMEACGSAHHWGGELRKLGHDVRLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCEEH
PAAYVKLYVKRGKTDAADAEAICEAVRRQSMRFVEIESEDQQAVLAIHSARDLVVRQRTQ
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VVNMIRSILREFGHILPTGIEAVSKFAREHGTEDQLDMPEIADGILGVMCHQLNGLNARV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
DGLTKLIEQHAWLDADARRLMRMPGIGPITASAIVATIGDAKQFETGRDLATWLGLTPLN
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCC
KSSGGKERLGRIIKKGDRYIRKLLIIGMTSRSLMAKNKPEKADTWTAKLPDEQPFRLATV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHH
AMANKSARIIWALLTKREEYRQPIV
HHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]