| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is pgm [H]
Identifier: 89055608
GI number: 89055608
Start: 3154479
End: 3156110
Strand: Direct
Name: pgm [H]
Synonym: Jann_3117
Alternate gene names: 89055608
Gene position: 3154479-3156110 (Clockwise)
Preceding gene: 89055607
Following gene: 89055609
Centisome position: 73.05
GC content: 64.95
Gene sequence:
>1632_bases ATGCAGCCTGATACCGTTGCCACGCAGCCCATCGCGGGCCAGAAGCCCGGCACATCCGGCCTTCGCAAGAAAACCCGCAC CTTCATGGAGCCGCACTTTCTGGAAAACTACGTTCAGTCGATCATCGACGGGATCGGCGGTGTGGTCGGGCAGACCTTGG TGGTGGGCGGCGACGGGCGCTACTTCAACGACCGCGCCATTCAGGTGATCCTGCGGATGCTGGCGGCCAACGGCGCTGCG GGCGCGGTGGTGGGCCAGGGCGGTATCCTATCAACGCCTGCCGCCTCTCACCTCATCCGCAAGCGGGGCACGGGCGGCGG CTTCATCCTGTCGGCCAGCCACAACCCCGGCGGGATCGACGCGGATTTCGGGTTGAAATTCAATGGTCCCAATGGCGGGC CTGCATCAGAGGGTGTGACCGCGAAGATCTTTGCCGCGACCGAAGCGATCACCGAATACCGCATCGTGGAAGCGCAGGAT GTGGATCTGGATACCATCGGGACCAGCACCCTCGGCGATCTGTCCGTGGAAATCGTCAACCCGGTCGCCGATTACGCAGA GCTGATGGAGAGCCTGTTCGATTTCGGCAAGATCCGCGCGCTCTTTGCCTCCGGCTTCCGGATGCGGTTCGATGCGATGC ACGCGGTCACGGGTCCCTATGCCACGGCGATCCTCGAAGACACGCTTGGGGCCGCGACGGGCACGGTGATCAACGGCACC CCCTCCCCCGATTTCGGCCAGGGCCACCCGGACCCCAACCCTGTCTGGGCAAAGACCCTGATGGATGAGATGTACGGCGA CGATTCCCCGGACTTTGGGGCCGCGTCTGATGGCGATGGTGATCGCAACATGATCGTGGGTCGCCGCCAATATGTGACGC CCTCCGACAGCCTTGCGCTTCTGGCGGCCCACGCCCATCGTGCGCCTGCCTATGCCAACGGTCTTGCCGGTGTCGCGCGC TCCATGCCGACCTCGGGGGCCGTTGATCGCGTGGCCGAGGCGCAAGGCATTGACTGTTATGAGACCCCCACCGGCTGGAA GTTCTTCGGGACCCTTCTGGACGCAGGAAAGGTAACGCTGTGCGGCGAGGAAAGTGCCGGCACCGGATCAGACCATGTAC GCGAAAAAGACGGGCTTTGGGCTGTGCTTCTTTGGCTCAACATCCTGGCGGACAGTGGCCAGTCCGTGGCTGATCTGATG GCCGCGCTCTGGCGGGACTTTGGGCGCTGTTATTACAGCCGCCACGACTATGAGGATGTGGAGGTCGACAAAGCCAATGC GGTCATGGACGGGTTGCGTGCGCGCCTTGCCACACTGCCGGGCACACAGGTCGCGGGCCTCACCGTCACCTTCGCCGATG AATTCGCCTATGACGATCCCGTGGACGGCAGCCGCGCGGAGGCTCAGGGCCTGCGCATCGGGTTCGAGGGCGGCGCGCGC GCCGTCTTCCGCCTCTCGGGCACCGGCACGGTTGGGGCCACGATCCGGATGTATCTGGAACGGCTGGAGACGTCCGCCGA CGCGCTGGATCAACCCGCCGAGACCGCTTTGCGCCCCGTTGTCGACGCCGCGCTGACGCTCTCGGATCTGGCGGCGCTGA CCGGGCGCGACAGCCCCAACGTCATCACGTAA
Upstream 100 bases:
>100_bases CAACCCGACCCAACCGCCCTGCCCCCCGGCGCAGACCCGCAGATCGACGCCAATTGCGTCGTCGTCTATGAGCTCCAACC CAACACGGAAGGACATAATC
Downstream 100 bases:
>100_bases AGGCACCTGTTCCTCCGCCCCGAAACATGGCAAGGCATCCGGGACACTTTTGATCCGCGGAATACCAAAATGAACGCCAT GTCAGACCTTTCCTCCGACG
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MQPDTVATQPIAGQKPGTSGLRKKTRTFMEPHFLENYVQSIIDGIGGVVGQTLVVGGDGRYFNDRAIQVILRMLAANGAA GAVVGQGGILSTPAASHLIRKRGTGGGFILSASHNPGGIDADFGLKFNGPNGGPASEGVTAKIFAATEAITEYRIVEAQD VDLDTIGTSTLGDLSVEIVNPVADYAELMESLFDFGKIRALFASGFRMRFDAMHAVTGPYATAILEDTLGAATGTVINGT PSPDFGQGHPDPNPVWAKTLMDEMYGDDSPDFGAASDGDGDRNMIVGRRQYVTPSDSLALLAAHAHRAPAYANGLAGVAR SMPTSGAVDRVAEAQGIDCYETPTGWKFFGTLLDAGKVTLCGEESAGTGSDHVREKDGLWAVLLWLNILADSGQSVADLM AALWRDFGRCYYSRHDYEDVEVDKANAVMDGLRARLATLPGTQVAGLTVTFADEFAYDDPVDGSRAEAQGLRIGFEGGAR AVFRLSGTGTVGATIRMYLERLETSADALDQPAETALRPVVDAALTLSDLAALTGRDSPNVIT
Sequences:
>Translated_543_residues MQPDTVATQPIAGQKPGTSGLRKKTRTFMEPHFLENYVQSIIDGIGGVVGQTLVVGGDGRYFNDRAIQVILRMLAANGAA GAVVGQGGILSTPAASHLIRKRGTGGGFILSASHNPGGIDADFGLKFNGPNGGPASEGVTAKIFAATEAITEYRIVEAQD VDLDTIGTSTLGDLSVEIVNPVADYAELMESLFDFGKIRALFASGFRMRFDAMHAVTGPYATAILEDTLGAATGTVINGT PSPDFGQGHPDPNPVWAKTLMDEMYGDDSPDFGAASDGDGDRNMIVGRRQYVTPSDSLALLAAHAHRAPAYANGLAGVAR SMPTSGAVDRVAEAQGIDCYETPTGWKFFGTLLDAGKVTLCGEESAGTGSDHVREKDGLWAVLLWLNILADSGQSVADLM AALWRDFGRCYYSRHDYEDVEVDKANAVMDGLRARLATLPGTQVAGLTVTFADEFAYDDPVDGSRAEAQGLRIGFEGGAR AVFRLSGTGTVGATIRMYLERLETSADALDQPAETALRPVVDAALTLSDLAALTGRDSPNVIT >Mature_543_residues MQPDTVATQPIAGQKPGTSGLRKKTRTFMEPHFLENYVQSIIDGIGGVVGQTLVVGGDGRYFNDRAIQVILRMLAANGAA GAVVGQGGILSTPAASHLIRKRGTGGGFILSASHNPGGIDADFGLKFNGPNGGPASEGVTAKIFAATEAITEYRIVEAQD VDLDTIGTSTLGDLSVEIVNPVADYAELMESLFDFGKIRALFASGFRMRFDAMHAVTGPYATAILEDTLGAATGTVINGT PSPDFGQGHPDPNPVWAKTLMDEMYGDDSPDFGAASDGDGDRNMIVGRRQYVTPSDSLALLAAHAHRAPAYANGLAGVAR SMPTSGAVDRVAEAQGIDCYETPTGWKFFGTLLDAGKVTLCGEESAGTGSDHVREKDGLWAVLLWLNILADSGQSVADLM AALWRDFGRCYYSRHDYEDVEVDKANAVMDGLRARLATLPGTQVAGLTVTFADEFAYDDPVDGSRAEAQGLRIGFEGGAR AVFRLSGTGTVGATIRMYLERLETSADALDQPAETALRPVVDAALTLSDLAALTGRDSPNVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=558, Percent_Identity=50.8960573476703, Blast_Score=534, Evalue=1e-152, Organism=Homo sapiens, GI21361621, Length=558, Percent_Identity=49.8207885304659, Blast_Score=526, Evalue=1e-149, Organism=Homo sapiens, GI133922562, Length=559, Percent_Identity=45.2593917710197, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI290463104, Length=366, Percent_Identity=50, Blast_Score=358, Evalue=1e-98, Organism=Homo sapiens, GI239743670, Length=128, Percent_Identity=42.96875, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI239741729, Length=128, Percent_Identity=44.53125, Blast_Score=94, Evalue=5e-19, Organism=Escherichia coli, GI1786904, Length=424, Percent_Identity=29.0094339622642, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17535441, Length=560, Percent_Identity=48.9285714285714, Blast_Score=513, Evalue=1e-145, Organism=Saccharomyces cerevisiae, GI6323752, Length=571, Percent_Identity=45.3590192644483, Blast_Score=492, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6322722, Length=570, Percent_Identity=45.2631578947368, Blast_Score=486, Evalue=1e-138, Organism=Drosophila melanogaster, GI17864244, Length=562, Percent_Identity=46.9750889679715, Blast_Score=515, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 57090; Mature: 57090
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDTVATQPIAGQKPGTSGLRKKTRTFMEPHFLENYVQSIIDGIGGVVGQTLVVGGDGR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCC YFNDRAIQVILRMLAANGAAGAVVGQGGILSTPAASHLIRKRGTGGGFILSASHNPGGID EECHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC ADFGLKFNGPNGGPASEGVTAKIFAATEAITEYRIVEAQDVDLDTIGTSTLGDLSVEIVN CCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHEEEEECCCCCCHHCCCCCCCCEEHHHHH PVADYAELMESLFDFGKIRALFASGFRMRFDAMHAVTGPYATAILEDTLGAATGTVINGT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCC PSPDFGQGHPDPNPVWAKTLMDEMYGDDSPDFGAASDGDGDRNMIVGRRQYVTPSDSLAL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCCHHH LAAHAHRAPAYANGLAGVARSMPTSGAVDRVAEAQGIDCYETPTGWKFFGTLLDAGKVTL HHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCEEE CGEESAGTGSDHVREKDGLWAVLLWLNILADSGQSVADLMAALWRDFGRCYYSRHDYEDV ECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC EVDKANAVMDGLRARLATLPGTQVAGLTVTFADEFAYDDPVDGSRAEAQGLRIGFEGGAR CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCCCCHHHCCEEEEECCCCE AVFRLSGTGTVGATIRMYLERLETSADALDQPAETALRPVVDAALTLSDLAALTGRDSPN EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC VIT CCC >Mature Secondary Structure MQPDTVATQPIAGQKPGTSGLRKKTRTFMEPHFLENYVQSIIDGIGGVVGQTLVVGGDGR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCC YFNDRAIQVILRMLAANGAAGAVVGQGGILSTPAASHLIRKRGTGGGFILSASHNPGGID EECHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC ADFGLKFNGPNGGPASEGVTAKIFAATEAITEYRIVEAQDVDLDTIGTSTLGDLSVEIVN CCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHEEEEECCCCCCHHCCCCCCCCEEHHHHH PVADYAELMESLFDFGKIRALFASGFRMRFDAMHAVTGPYATAILEDTLGAATGTVINGT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCC PSPDFGQGHPDPNPVWAKTLMDEMYGDDSPDFGAASDGDGDRNMIVGRRQYVTPSDSLAL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCCHHH LAAHAHRAPAYANGLAGVARSMPTSGAVDRVAEAQGIDCYETPTGWKFFGTLLDAGKVTL HHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCEEE CGEESAGTGSDHVREKDGLWAVLLWLNILADSGQSVADLMAALWRDFGRCYYSRHDYEDV ECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC EVDKANAVMDGLRARLATLPGTQVAGLTVTFADEFAYDDPVDGSRAEAQGLRIGFEGGAR CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCCCCHHHCCEEEEECCCCE AVFRLSGTGTVGATIRMYLERLETSADALDQPAETALRPVVDAALTLSDLAALTGRDSPN EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC VIT CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]