Click here to switch to the map view.

The map label for this gene is glgC

Identifier: 89055605

GI number: 89055605

Start: 3149712

End: 3150968

Strand: Direct

Name: glgC

Synonym: Jann_3114

Alternate gene names: 89055605

Gene position: 3149712-3150968 (Clockwise)

Preceding gene: 89055604

Following gene: 89055606

Centisome position: 72.94

GC content: 61.34

Gene sequence:

>1257_bases
ATGGAAACGAAACGTTTGACCCAACGCTCCATGGTGTTCGTGCTGGCCGGGGGGCGGGGCAGTCGGCTGAAAGAGCTGAC
GGATCGCCGCGTGAAACCTGCCGTTCCCTTTGGCGGCAAAGCGCGGATCATCGACTTCGCGCTGTCGAATGCGCTGAACT
CGGGCATCCGAAAGATGGCGATCGCCACGCAGTACAAGGCGCACTCGCTTATTCGGCACCTACAACGGGGCTGGACGTTT
TTCCGGGCCGAACGAAACGAATTCCTTGACATCCTGCCCGCTTCGCAACGCACCGGGACCGAGGCCTGGTATGCGGGCAC
GGCGGACGCGGTGACCCAGAACATCGACATCGTCGACAGCTATGATGTGGATTACGTGATCATTCTGGCGGGCGATCATA
TCTACAAGATGGATTACGAGGTCATGCTGCGCGAGCATGTGGAAACCGGCGCAGACGTCACCGTCGGCTGCCTCACCGTG
CCGCGGATGGAAGCCACGGCATTTGGCGTCATGGCGACGGATGAGACGGGTAAGATCACGTCATTCCTGGAGAAGCCCGC
CGACCCGCCCGCGATGCCGGACGACCCCAACAGCGCCCTGGCCTCCATGGGGATCTACGTCTTCAAATGGTCTTTCCTGC
GCGAGTTGCTGGTCGCCGATGCCCTCGACACGAATTCCTCCCACGATTTTGGCCATGACCTGATCCCGGAGATCGTGGAG
AACGGCAAGGCGATGGCGCACCGGTATGACCGGTCCTGCGTGCGGGCCGATGGCGCCCCCGTCTATTGGAAGGATGTGGG
CACCGTGGATGCGTTTTGGGAGGCACATATTGACCTTACCAACTTCACGCCTGATCTGGATTTGTGGGACAAGAACTGGC
CGATCTGGACGTATTCAGAGTCCGTTCCGCCGGCGAAATTCATCCACGATGAACGGGATCGGCGCGGTATGGCGATCTCC
TCCATGGTGGCGGGGGGCTGCATCATCTCGGGCACGGAGGTGCGCAATTCCTGCCTGTTCACCGGCGTACATACCAATTC
CTACGCCGTCCTCGACCATGCGGTCGTGCTGCCCAACGTCGTCGTCAACCGCCACGCCCGGCTGCGCAAGGTCGTGGTCG
ACAGTGATGTGGTTGTCCCCGAGGGGCTGGTGGTCGGCGAAGACCCGACGGAAGACGCCAAGTGGTTCCGCGTGTCCGAG
CGGGGCGTGACGCTGATCACACAAGACATGCTCGACAAGCGTGCGCAGGCACAATGA

Upstream 100 bases:

>100_bases
GCGATGGGCATGCGCAGTCCGTCACGCTGACCCTGCCGCCCTTATCGACAGTCGTTTTGCGGCTGAAAGACTAACTGACA
GGTTCGGGGAGGAACCAGGG

Downstream 100 bases:

>100_bases
CCCGAGTGCTCTCCGTCGCATCTGAATGCGCGCCGCTGGTGAAAACCGGCGGCCTTGCGGATGTTGTGGGGGCACTTCCG
GGGGCGATGGCCGCGCTCGG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
METKRLTQRSMVFVLAGGRGSRLKELTDRRVKPAVPFGGKARIIDFALSNALNSGIRKMAIATQYKAHSLIRHLQRGWTF
FRAERNEFLDILPASQRTGTEAWYAGTADAVTQNIDIVDSYDVDYVIILAGDHIYKMDYEVMLREHVETGADVTVGCLTV
PRMEATAFGVMATDETGKITSFLEKPADPPAMPDDPNSALASMGIYVFKWSFLRELLVADALDTNSSHDFGHDLIPEIVE
NGKAMAHRYDRSCVRADGAPVYWKDVGTVDAFWEAHIDLTNFTPDLDLWDKNWPIWTYSESVPPAKFIHDERDRRGMAIS
SMVAGGCIISGTEVRNSCLFTGVHTNSYAVLDHAVVLPNVVVNRHARLRKVVVDSDVVVPEGLVVGEDPTEDAKWFRVSE
RGVTLITQDMLDKRAQAQ

Sequences:

>Translated_418_residues
METKRLTQRSMVFVLAGGRGSRLKELTDRRVKPAVPFGGKARIIDFALSNALNSGIRKMAIATQYKAHSLIRHLQRGWTF
FRAERNEFLDILPASQRTGTEAWYAGTADAVTQNIDIVDSYDVDYVIILAGDHIYKMDYEVMLREHVETGADVTVGCLTV
PRMEATAFGVMATDETGKITSFLEKPADPPAMPDDPNSALASMGIYVFKWSFLRELLVADALDTNSSHDFGHDLIPEIVE
NGKAMAHRYDRSCVRADGAPVYWKDVGTVDAFWEAHIDLTNFTPDLDLWDKNWPIWTYSESVPPAKFIHDERDRRGMAIS
SMVAGGCIISGTEVRNSCLFTGVHTNSYAVLDHAVVLPNVVVNRHARLRKVVVDSDVVVPEGLVVGEDPTEDAKWFRVSE
RGVTLITQDMLDKRAQAQ
>Mature_418_residues
METKRLTQRSMVFVLAGGRGSRLKELTDRRVKPAVPFGGKARIIDFALSNALNSGIRKMAIATQYKAHSLIRHLQRGWTF
FRAERNEFLDILPASQRTGTEAWYAGTADAVTQNIDIVDSYDVDYVIILAGDHIYKMDYEVMLREHVETGADVTVGCLTV
PRMEATAFGVMATDETGKITSFLEKPADPPAMPDDPNSALASMGIYVFKWSFLRELLVADALDTNSSHDFGHDLIPEIVE
NGKAMAHRYDRSCVRADGAPVYWKDVGTVDAFWEAHIDLTNFTPDLDLWDKNWPIWTYSESVPPAKFIHDERDRRGMAIS
SMVAGGCIISGTEVRNSCLFTGVHTNSYAVLDHAVVLPNVVVNRHARLRKVVVDSDVVVPEGLVVGEDPTEDAKWFRVSE
RGVTLITQDMLDKRAQAQ

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Escherichia coli, GI1789837, Length=419, Percent_Identity=57.0405727923628, Blast_Score=516, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_JANSC (Q28MN1)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_511056.1
- ProteinModelPortal:   Q28MN1
- SMR:   Q28MN1
- STRING:   Q28MN1
- GeneID:   3935585
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_3114
- eggNOG:   COG0448
- HOGENOM:   HBG703946
- OMA:   GTVDAYW
- PhylomeDB:   Q28MN1
- ProtClustDB:   PRK00725
- BioCyc:   JSP290400:JANN_3114-MONOMER
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 46621; Mature: 46621

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKRLTQRSMVFVLAGGRGSRLKELTDRRVKPAVPFGGKARIIDFALSNALNSGIRKMA
CCCHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
IATQYKAHSLIRHLQRGWTFFRAERNEFLDILPASQRTGTEAWYAGTADAVTQNIDIVDS
HHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCCCEEECCCHHHHHCCCCEEEC
YDVDYVIILAGDHIYKMDYEVMLREHVETGADVTVGCLTVPRMEATAFGVMATDETGKIT
CCCCEEEEEECCEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCHHEEEEEEECCCCHHH
SFLEKPADPPAMPDDPNSALASMGIYVFKWSFLRELLVADALDTNSSHDFGHDLIPEIVE
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
NGKAMAHRYDRSCVRADGAPVYWKDVGTVDAFWEAHIDLTNFTPDLDLWDKNWPIWTYSE
CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHEEEEEECCCCCCCCCCCCCCCEEEECC
SVPPAKFIHDERDRRGMAISSMVAGGCIISGTEVRNSCLFTGVHTNSYAVLDHAVVLPNV
CCCCHHHHCCCHHCCCCCHHHHHCCCEEEECCHHCCCEEEEEECCCCEEEHHHHHHHHHH
VVNRHARLRKVVVDSDVVVPEGLVVGEDPTEDAKWFRVSERGVTLITQDMLDKRAQAQ
HHHCHHHHHEEEECCCEECCCCEEECCCCCCCCCEEEECCCCCEEEEHHHHHHHHCCC
>Mature Secondary Structure
METKRLTQRSMVFVLAGGRGSRLKELTDRRVKPAVPFGGKARIIDFALSNALNSGIRKMA
CCCHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
IATQYKAHSLIRHLQRGWTFFRAERNEFLDILPASQRTGTEAWYAGTADAVTQNIDIVDS
HHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCCCEEECCCHHHHHCCCCEEEC
YDVDYVIILAGDHIYKMDYEVMLREHVETGADVTVGCLTVPRMEATAFGVMATDETGKIT
CCCCEEEEEECCEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCHHEEEEEEECCCCHHH
SFLEKPADPPAMPDDPNSALASMGIYVFKWSFLRELLVADALDTNSSHDFGHDLIPEIVE
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
NGKAMAHRYDRSCVRADGAPVYWKDVGTVDAFWEAHIDLTNFTPDLDLWDKNWPIWTYSE
CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHEEEEEECCCCCCCCCCCCCCCEEEECC
SVPPAKFIHDERDRRGMAISSMVAGGCIISGTEVRNSCLFTGVHTNSYAVLDHAVVLPNV
CCCCHHHHCCCHHCCCCCHHHHHCCCEEEECCHHCCCEEEEEECCCCEEEHHHHHHHHHH
VVNRHARLRKVVVDSDVVVPEGLVVGEDPTEDAKWFRVSERGVTLITQDMLDKRAQAQ
HHHCHHHHHEEEECCCEECCCCEEECCCCCCCCCEEEECCCCCEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA