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The map label for this gene is ycjP [C]

Identifier: 89055395

GI number: 89055395

Start: 2924159

End: 2924989

Strand: Direct

Name: ycjP [C]

Synonym: Jann_2904

Alternate gene names: 89055395

Gene position: 2924159-2924989 (Clockwise)

Preceding gene: 89055394

Following gene: 89055396

Centisome position: 67.72

GC content: 59.09

Gene sequence:

>831_bases
ATGGCTAGAGCTGTCACAAACCAACGCAAGGCCCTGAACACGGCGATCGCGTGGATCATCGGCCTGATGATCTTCTTCCC
CATCCTCTGGACGATCCTGACATCGTTCAAGACCGAGGCCGACGCCATCGCGAACCCGCCGATCCTGTTTGCCTTCGACT
GGACGCTGGAGAATTACCGGGAGGTGATGGAGCGATCGAATTACGGGCGCTTCCTGTCAAACTCGATCCTGATTGCCGGT
GGCTCGACCATCCTGGGCATCATCATCGCCGTGCCTGCGGCCTGGTCAATGGCCTTCGTGCCCTCGCGCCGGACCAAGGA
CATCCTGCTGTGGATGTTGTCCACCAAGATGCTGCCTGCCGTGGGCGTGCTCTACCCTATCTACCTGCTGTGCATTCAGC
TTGGTGTGTTGGACAACCGCTACGCCTTGGTGGTGATCCTGATGCTGATCAACCTGCCGATCATCGTCTGGATGCTCTAC
ACCTACTTCAAGGAGATCCCCGGCGAGATCCTTGAAGCGGCCCGGATGGACGGCGCGTCCCTGAAAGAGGAAATCCTGTA
CGTGCTGACACCCATGGCCGTGCCAGGCATCGCCTCGACCCTGCTGCTAAACTTCATTCTGGCGTGGAACGAAGCCTTCT
GGACGCTGAACCTGACATCGGTCGATGCGGCCCCGTTGACGGCCTTCATCGCCAGCTACTCTTCGCCGGAAGGTCTATTC
TTCGCGAAACTCTCGGCGGCCTCCACGATGGCCATCGCCCCGATCCTCATCCTTGGCTGGTTCAGCCAAAAGCAACTCGT
CCGCGGTCTGACTTTCGGTGCCGTCAAGTAA

Upstream 100 bases:

>100_bases
GGATCTGCGGGCGGCGTCTATGCCATCATTCTTGCCAATATCGTTGCCATCTTCCTGATGCGCATCGTCGGCAAAAACCT
GGATAAGTGAGGGACTGGAT

Downstream 100 bases:

>100_bases
GTGCTCAAGCTTGAGCAGCCCTCTAAGGGTATGAAAGGAAACGAAAATGGGAAATATCACGCTCGATAAGGTCCAGAAGT
CCTTTGGCGAAGTCGAAGTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MARAVTNQRKALNTAIAWIIGLMIFFPILWTILTSFKTEADAIANPPILFAFDWTLENYREVMERSNYGRFLSNSILIAG
GSTILGIIIAVPAAWSMAFVPSRRTKDILLWMLSTKMLPAVGVLYPIYLLCIQLGVLDNRYALVVILMLINLPIIVWMLY
TYFKEIPGEILEAARMDGASLKEEILYVLTPMAVPGIASTLLLNFILAWNEAFWTLNLTSVDAAPLTAFIASYSSPEGLF
FAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Sequences:

>Translated_276_residues
MARAVTNQRKALNTAIAWIIGLMIFFPILWTILTSFKTEADAIANPPILFAFDWTLENYREVMERSNYGRFLSNSILIAG
GSTILGIIIAVPAAWSMAFVPSRRTKDILLWMLSTKMLPAVGVLYPIYLLCIQLGVLDNRYALVVILMLINLPIIVWMLY
TYFKEIPGEILEAARMDGASLKEEILYVLTPMAVPGIASTLLLNFILAWNEAFWTLNLTSVDAAPLTAFIASYSSPEGLF
FAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
>Mature_275_residues
ARAVTNQRKALNTAIAWIIGLMIFFPILWTILTSFKTEADAIANPPILFAFDWTLENYREVMERSNYGRFLSNSILIAGG
STILGIIIAVPAAWSMAFVPSRRTKDILLWMLSTKMLPAVGVLYPIYLLCIQLGVLDNRYALVVILMLINLPIIVWMLYT
YFKEIPGEILEAARMDGASLKEEILYVLTPMAVPGIASTLLLNFILAWNEAFWTLNLTSVDAAPLTAFIASYSSPEGLFF
AKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=28.2142857142857, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30622; Mature: 30491

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVTNQRKALNTAIAWIIGLMIFFPILWTILTSFKTEADAIANPPILFAFDWTLENYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCHHHHH
EVMERSNYGRFLSNSILIAGGSTILGIIIAVPAAWSMAFVPSRRTKDILLWMLSTKMLPA
HHHHHCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VGVLYPIYLLCIQLGVLDNRYALVVILMLINLPIIVWMLYTYFKEIPGEILEAARMDGAS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
LKEEILYVLTPMAVPGIASTLLLNFILAWNEAFWTLNLTSVDAAPLTAFIASYSSPEGLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCEE
FAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARAVTNQRKALNTAIAWIIGLMIFFPILWTILTSFKTEADAIANPPILFAFDWTLENYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCHHHHH
EVMERSNYGRFLSNSILIAGGSTILGIIIAVPAAWSMAFVPSRRTKDILLWMLSTKMLPA
HHHHHCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VGVLYPIYLLCIQLGVLDNRYALVVILMLINLPIIVWMLYTYFKEIPGEILEAARMDGAS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
LKEEILYVLTPMAVPGIASTLLLNFILAWNEAFWTLNLTSVDAAPLTAFIASYSSPEGLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCEE
FAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]