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The map label for this gene is dcyD [H]

Identifier: 89055367

GI number: 89055367

Start: 2895705

End: 2896733

Strand: Direct

Name: dcyD [H]

Synonym: Jann_2876

Alternate gene names: 89055367

Gene position: 2895705-2896733 (Clockwise)

Preceding gene: 89055359

Following gene: 89055369

Centisome position: 67.06

GC content: 66.96

Gene sequence:

>1029_bases
ATGCATCCTCGCTTGCCCATCGTCACCGCCCCCACCCCGCTGGACCCCGCCGAAAATCTGTCCGCGCATCTTGGGATAGA
CCTGCACATCAAACGCGATGACCTTGCCGGGCCCACATTGGGCGGCAACAAGGCGCGGCAATTGGAATATTACTTTGGCG
CGGCACAGGCCGAGCGGGCGGATGTGATCCTGATCACCGGGGCGGTCCAGTCCAACTTCGCGCGCCTCGCGGTGGCCATC
GCGCGGCGACAGGGGATGGAGGCAGTGATCCAGCTGGAGGACCGCGTGCCGGGCAAACCCGCGCAGTACCGCGCAGGCGG
CAATGTGCTTCTGTCTCGGTTGATGGGGGCGGAGATCCTCAACTACCCCGAGGGGGAGGATGAAGCGGGCGCCGATGCCG
CCCTTCACACCAAGGCAGAGGCGTTGCGCGCGGAGGGCAAGCGGCCCTATGTGATTCACCTGTCGGAAGGGCACCCGCCG
CTGGGGGCGCTGGGATATGTGGATGCGGCCCATGAGATCCTGGCGCAGAAGTCTGACTTCGACATCTTCGTCGTGGCATC
GGGCAGCGGATCGACCCATGCGGGGCTATTAGCCGGGCTGCGGGGGGCCGGATGCACGGCCCCTGTCATCGGGTCCTGCG
TGCGGCGCGCGGCATCGGTGCAGACGCCCCGGATCAGGCGCGTGACTGACCGATTGGCCAAGCTACACGACGGCGCGACG
CGGGTCACGGACGCGGATATCATCACATGGGACGGGGCCTTGTCGCCGGGATATGGCCAGTTGGGACCAGCCGCGCGGGA
CGCGATGGAGATGATGGCGCGCCATGAGGGGCTGATGCTGGACCCGGTCTATACCGCCAAGAGTTTCGCCGCGATCCCGG
CCCTTGTGGCCAGCGGCGAGATCCCCAAGGGCAGCCGGGTGTGTTTCGTGCATACCGGCGGGCTGGCGGCTTTGTTTGCC
TATGAGGCCGCGCTGACAGAGGGGCTTGAAGCGCGGCCTACGGATCTTCCAGACGCGGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
AATTCGGGACGGCAGCGGAGGAAAGGATCCCATTTGCGGCCCGGATCACAGCCCTGCACGCGTGTTGCCATTTGCGCCGC
CCCGCCCCATCGTCAGCCCC

Downstream 100 bases:

>100_bases
TATCGGCCAGTTGGCGCCACACCTCATCTTCCCAACGGCACCGCACGTTTTCCCCCAGGGCCGAGATCGCACGGAAGCGG
GGCCAGTAGATACCATAGCG

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MHPRLPIVTAPTPLDPAENLSAHLGIDLHIKRDDLAGPTLGGNKARQLEYYFGAAQAERADVILITGAVQSNFARLAVAI
ARRQGMEAVIQLEDRVPGKPAQYRAGGNVLLSRLMGAEILNYPEGEDEAGADAALHTKAEALRAEGKRPYVIHLSEGHPP
LGALGYVDAAHEILAQKSDFDIFVVASGSGSTHAGLLAGLRGAGCTAPVIGSCVRRAASVQTPRIRRVTDRLAKLHDGAT
RVTDADIITWDGALSPGYGQLGPAARDAMEMMARHEGLMLDPVYTAKSFAAIPALVASGEIPKGSRVCFVHTGGLAALFA
YEAALTEGLEARPTDLPDAARR

Sequences:

>Translated_342_residues
MHPRLPIVTAPTPLDPAENLSAHLGIDLHIKRDDLAGPTLGGNKARQLEYYFGAAQAERADVILITGAVQSNFARLAVAI
ARRQGMEAVIQLEDRVPGKPAQYRAGGNVLLSRLMGAEILNYPEGEDEAGADAALHTKAEALRAEGKRPYVIHLSEGHPP
LGALGYVDAAHEILAQKSDFDIFVVASGSGSTHAGLLAGLRGAGCTAPVIGSCVRRAASVQTPRIRRVTDRLAKLHDGAT
RVTDADIITWDGALSPGYGQLGPAARDAMEMMARHEGLMLDPVYTAKSFAAIPALVASGEIPKGSRVCFVHTGGLAALFA
YEAALTEGLEARPTDLPDAARR
>Mature_342_residues
MHPRLPIVTAPTPLDPAENLSAHLGIDLHIKRDDLAGPTLGGNKARQLEYYFGAAQAERADVILITGAVQSNFARLAVAI
ARRQGMEAVIQLEDRVPGKPAQYRAGGNVLLSRLMGAEILNYPEGEDEAGADAALHTKAEALRAEGKRPYVIHLSEGHPP
LGALGYVDAAHEILAQKSDFDIFVVASGSGSTHAGLLAGLRGAGCTAPVIGSCVRRAASVQTPRIRRVTDRLAKLHDGAT
RVTDADIITWDGALSPGYGQLGPAARDAMEMMARHEGLMLDPVYTAKSFAAIPALVASGEIPKGSRVCFVHTGGLAALFA
YEAALTEGLEARPTDLPDAARR

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=322, Percent_Identity=37.5776397515528, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 36038; Mature: 36038

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPRLPIVTAPTPLDPAENLSAHLGIDLHIKRDDLAGPTLGGNKARQLEYYFGAAQAERA
CCCCCCEEECCCCCCHHHCCHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC
DVILITGAVQSNFARLAVAIARRQGMEAVIQLEDRVPGKPAQYRAGGNVLLSRLMGAEIL
CEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
NYPEGEDEAGADAALHTKAEALRAEGKRPYVIHLSEGHPPLGALGYVDAAHEILAQKSDF
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
DIFVVASGSGSTHAGLLAGLRGAGCTAPVIGSCVRRAASVQTPRIRRVTDRLAKLHDGAT
CEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
RVTDADIITWDGALSPGYGQLGPAARDAMEMMARHEGLMLDPVYTAKSFAAIPALVASGE
EECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCC
IPKGSRVCFVHTGGLAALFAYEAALTEGLEARPTDLPDAARR
CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MHPRLPIVTAPTPLDPAENLSAHLGIDLHIKRDDLAGPTLGGNKARQLEYYFGAAQAERA
CCCCCCEEECCCCCCHHHCCHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC
DVILITGAVQSNFARLAVAIARRQGMEAVIQLEDRVPGKPAQYRAGGNVLLSRLMGAEIL
CEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
NYPEGEDEAGADAALHTKAEALRAEGKRPYVIHLSEGHPPLGALGYVDAAHEILAQKSDF
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
DIFVVASGSGSTHAGLLAGLRGAGCTAPVIGSCVRRAASVQTPRIRRVTDRLAKLHDGAT
CEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
RVTDADIITWDGALSPGYGQLGPAARDAMEMMARHEGLMLDPVYTAKSFAAIPALVASGE
EECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCC
IPKGSRVCFVHTGGLAALFAYEAALTEGLEARPTDLPDAARR
CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA