| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is phnN [C]
Identifier: 89055346
GI number: 89055346
Start: 2875271
End: 2875834
Strand: Reverse
Name: phnN [C]
Synonym: Jann_2855
Alternate gene names: 89055346
Gene position: 2875834-2875271 (Counterclockwise)
Preceding gene: 89055348
Following gene: 89055344
Centisome position: 66.6
GC content: 66.67
Gene sequence:
>564_bases ATGTCTAGCCCCGAGCCCACTCCCAAAGGTCGGCTGATCGCCGTTATCGGCCCGTCCGGAGCGGGCAAGGACAGCGTGAT GGACGGGCTGTGTGCCGCGCGCCCGGAACTGCAAAGCGCAAGGCGGGTCATCACCCGGGCCAGCACTGCGGGAGGGGAGG CTTTTGATGCCGTCTCGGAGGCCACATTCGCCATGAAGGCCGCGCGGGGTGACTTTGCGCTGCACTGGCAGGCCCATGGG TTGAACTATGGGATCCCGACCGGGGTGCAAGAGGCGTTGGACAGAGGGCTGGACGTGCTTGCCAACCTCTCTCGCGGGGC GCTGGCGGAGGCCGAAGGAGTTTTTGAGAACATGGTCGTGTTACACATAACCGCGCCGCCCGATGTCCTGGCACAGCGCG TGGCCCGCAGGGGACGCGAAATGGGGCGCGACGCGGCAGCGCGCCTGACGCGGCCAGCCCCGGCTTTGCCCGATGGCCTG AAGGTGATCGAGATCGACAATTCCGGTTCACTGGCCGACAGCATCGCCACGGCGCTCGACGCGCTTTATCCGGACAGGGG GTAG
Upstream 100 bases:
>100_bases TCCCAATTTTGTGGACCTCCCGATGAAAGGTGTTGCGCGGGCCCGGGCTCGCACGGTAAGAATTTGTATAGTTGTATAAT TAAATGGACAACGCCGCAAG
Downstream 100 bases:
>100_bases CGGTGGATCAGATGAAACGCACCCTCCGCGTCCTCGCCCATCAGCGCGAGGCTTTCAATCACGAAGGGCCGCGGCAGGAC CGGCGCGAAGTGCTGCGCCA
Product: phosphonate metabolism, 1,5-bisphosphokinase PhnN
Products: NA
Alternate protein names: TdRPase 1 [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSSPEPTPKGRLIAVIGPSGAGKDSVMDGLCAARPELQSARRVITRASTAGGEAFDAVSEATFAMKAARGDFALHWQAHG LNYGIPTGVQEALDRGLDVLANLSRGALAEAEGVFENMVVLHITAPPDVLAQRVARRGREMGRDAAARLTRPAPALPDGL KVIEIDNSGSLADSIATALDALYPDRG
Sequences:
>Translated_187_residues MSSPEPTPKGRLIAVIGPSGAGKDSVMDGLCAARPELQSARRVITRASTAGGEAFDAVSEATFAMKAARGDFALHWQAHG LNYGIPTGVQEALDRGLDVLANLSRGALAEAEGVFENMVVLHITAPPDVLAQRVARRGREMGRDAAARLTRPAPALPDGL KVIEIDNSGSLADSIATALDALYPDRG >Mature_186_residues SSPEPTPKGRLIAVIGPSGAGKDSVMDGLCAARPELQSARRVITRASTAGGEAFDAVSEATFAMKAARGDFALHWQAHGL NYGIPTGVQEALDRGLDVLANLSRGALAEAEGVFENMVVLHITAPPDVLAQRVARRGREMGRDAAARLTRPAPALPDGLK VIEIDNSGSLADSIATALDALYPDRG
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790532, Length=176, Percent_Identity=36.9318181818182, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR012699 - InterPro: IPR013102 - InterPro: IPR000053 - InterPro: IPR017872 - InterPro: IPR013466 [H]
Pfam domain/function: PF00591 Glycos_transf_3; PF07831 PYNP_C [H]
EC number: =2.4.2.4 [H]
Molecular weight: Translated: 19480; Mature: 19349
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPEPTPKGRLIAVIGPSGAGKDSVMDGLCAARPELQSARRVITRASTAGGEAFDAVSE CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH ATFAMKAARGDFALHWQAHGLNYGIPTGVQEALDRGLDVLANLSRGALAEAEGVFENMVV HHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEE LHITAPPDVLAQRVARRGREMGRDAAARLTRPAPALPDGLKVIEIDNSGSLADSIATALD EEEECCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH ALYPDRG HHCCCCC >Mature Secondary Structure SSPEPTPKGRLIAVIGPSGAGKDSVMDGLCAARPELQSARRVITRASTAGGEAFDAVSE CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH ATFAMKAARGDFALHWQAHGLNYGIPTGVQEALDRGLDVLANLSRGALAEAEGVFENMVV HHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEE LHITAPPDVLAQRVARRGREMGRDAAARLTRPAPALPDGLKVIEIDNSGSLADSIATALD EEEECCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH ALYPDRG HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA