Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055345

Identifier: 89055345

GI number: 89055345

Start: 2874813

End: 2875289

Strand: Direct

Name: 89055345

Synonym: Jann_2854

Alternate gene names: NA

Gene position: 2874813-2875289 (Clockwise)

Preceding gene: 89055343

Following gene: 89055347

Centisome position: 66.58

GC content: 67.92

Gene sequence:

>477_bases
TTGATGGATGGGACGAACGCCGCGGGCCTTGACGCTGCAGCCCGCTGGTTCTGCGCGGGCCGCGTCCCGGTGGAGATCCC
GGCCCTCGACATCCGCCGTCTTGGCACCTTCGTGGCGCTGGTTCCATCGGCGCCATCGGAGGGCCTCGCCGACCTCGCAG
GGGCAGCCGTTGAGGCGCTGGACCCGTTCCGGGCACCGCCGTCTGAGGCCGAGCTTGCGCGCCGTCGCAAGCCGGGCCTC
AGTGATCGCCAGGAGACTATGTTGCAGCGTTGGGGGTATCCCTATTTGCGCGAAGAGTTCAGATTTCACATGACGTTGAC
GGGGCGCACCGCCGAGGCCGAGCGGGTGTGCACCGCCTTGGCGCAGCACTTCGCGCCGGTCCTGCCGCGGCCCTTCGTGA
TTGAAAGCCTCGCGCTGATGGGCGAGGACGCGGAGGGTGCGTTTCATCTGATCCACCGCTACCCCCTGTCCGGATAA

Upstream 100 bases:

>100_bases
GTCGGTCACGCAACCGACGGTTTCGGGTCTGGATGCAGAGGCTTTGACAGCCACCCCACGCAAATATGGCTTCCACGGCA
CGATCAAGCCGCCATTTGCC

Downstream 100 bases:

>100_bases
AGCGCGTCGAGCGCCGTGGCGATGCTGTCGGCCAGTGAACCGGAATTGTCGATCTCGATCACCTTCAGGCCATCGGGCAA
AGCCGGGGCTGGCCGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MMDGTNAAGLDAAARWFCAGRVPVEIPALDIRRLGTFVALVPSAPSEGLADLAGAAVEALDPFRAPPSEAELARRRKPGL
SDRQETMLQRWGYPYLREEFRFHMTLTGRTAEAERVCTALAQHFAPVLPRPFVIESLALMGEDAEGAFHLIHRYPLSG

Sequences:

>Translated_158_residues
MMDGTNAAGLDAAARWFCAGRVPVEIPALDIRRLGTFVALVPSAPSEGLADLAGAAVEALDPFRAPPSEAELARRRKPGL
SDRQETMLQRWGYPYLREEFRFHMTLTGRTAEAERVCTALAQHFAPVLPRPFVIESLALMGEDAEGAFHLIHRYPLSG
>Mature_158_residues
MMDGTNAAGLDAAARWFCAGRVPVEIPALDIRRLGTFVALVPSAPSEGLADLAGAAVEALDPFRAPPSEAELARRRKPGL
SDRQETMLQRWGYPYLREEFRFHMTLTGRTAEAERVCTALAQHFAPVLPRPFVIESLALMGEDAEGAFHLIHRYPLSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17315; Mature: 17315

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDGTNAAGLDAAARWFCAGRVPVEIPALDIRRLGTFVALVPSAPSEGLADLAGAAVEAL
CCCCCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
DPFRAPPSEAELARRRKPGLSDRQETMLQRWGYPYLREEFRFHMTLTGRTAEAERVCTAL
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHEEEEEECCCCHHHHHHHHHH
AQHFAPVLPRPFVIESLALMGEDAEGAFHLIHRYPLSG
HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMDGTNAAGLDAAARWFCAGRVPVEIPALDIRRLGTFVALVPSAPSEGLADLAGAAVEAL
CCCCCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
DPFRAPPSEAELARRRKPGLSDRQETMLQRWGYPYLREEFRFHMTLTGRTAEAERVCTAL
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHEEEEEECCCCHHHHHHHHHH
AQHFAPVLPRPFVIESLALMGEDAEGAFHLIHRYPLSG
HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA