| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cheY [H]
Identifier: 89055329
GI number: 89055329
Start: 2855769
End: 2856155
Strand: Reverse
Name: cheY [H]
Synonym: Jann_2838
Alternate gene names: 89055329
Gene position: 2856155-2855769 (Counterclockwise)
Preceding gene: 89055330
Following gene: 89055328
Centisome position: 66.15
GC content: 55.56
Gene sequence:
>387_bases ATGAGTACAAAGGATAAACTACGCGTGTTGGTGGTTGACGACATGTCGACCAGCCGGGGATTGATCGTCCAGGCGTTGGA GTGGATGGGGATCGGCGCGATTGATCACTGTGCGGATGGAACGACCGCCTTGCAGAAAATGGCGTCGTCCCCGGTGCATA TGGTGATCTCGGACTACAACATGCCCGGCATGGATGGCCTGCAGTTGCTGCACTCGTTGAGAAGCAATCAGCAGACCGCG CGGACCGGGTTTATCCTGATCACGGGAACCACCGACAACGGGGTCATCGACAAGGGAAAACAGTTGGGGATGAACAATTT TCTGAAAAAACCCTTTTCACCAACGGCCCTGAAGGCTTGCATCGAACGCGTCGTTGGGCCCCTGTAG
Upstream 100 bases:
>100_bases TGATGATCGGTCATTCGGAGCGTGTCACGGGGCCGGCTCTGACACCATTGCGATCCGTCGGCGTCACGCATTATGAACTG CAAGCCCAGGGGGCAATGAC
Downstream 100 bases:
>100_bases ATGGAACCGACGTCAGGGCAGACCATCGGGGCGAAAGCCCTGTTGCGCAATGTAGCGGCTGAGGTCGCGTGTTGGGCGCA GGTTGCCGAGCGTCTGGACG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSTKDKLRVLVVDDMSTSRGLIVQALEWMGIGAIDHCADGTTALQKMASSPVHMVISDYNMPGMDGLQLLHSLRSNQQTA RTGFILITGTTDNGVIDKGKQLGMNNFLKKPFSPTALKACIERVVGPL
Sequences:
>Translated_128_residues MSTKDKLRVLVVDDMSTSRGLIVQALEWMGIGAIDHCADGTTALQKMASSPVHMVISDYNMPGMDGLQLLHSLRSNQQTA RTGFILITGTTDNGVIDKGKQLGMNNFLKKPFSPTALKACIERVVGPL >Mature_127_residues STKDKLRVLVVDDMSTSRGLIVQALEWMGIGAIDHCADGTTALQKMASSPVHMVISDYNMPGMDGLQLLHSLRSNQQTAR TGFILITGTTDNGVIDKGKQLGMNNFLKKPFSPTALKACIERVVGPL
Specific function: Putative member of a two-component regulatory system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=123, Percent_Identity=31.7073170731707, Blast_Score=80, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13831; Mature: 13700
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKDKLRVLVVDDMSTSRGLIVQALEWMGIGAIDHCADGTTALQKMASSPVHMVISDYN CCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCEEEEEECCC MPGMDGLQLLHSLRSNQQTARTGFILITGTTDNGVIDKGKQLGMNNFLKKPFSPTALKAC CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHCCHHHHHCCCCCHHHHHHH IERVVGPL HHHHHCCC >Mature Secondary Structure STKDKLRVLVVDDMSTSRGLIVQALEWMGIGAIDHCADGTTALQKMASSPVHMVISDYN CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCEEEEEECCC MPGMDGLQLLHSLRSNQQTARTGFILITGTTDNGVIDKGKQLGMNNFLKKPFSPTALKAC CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHCCHHHHHCCCCCHHHHHHH IERVVGPL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA