Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055321

Identifier: 89055321

GI number: 89055321

Start: 2847363

End: 2847788

Strand: Direct

Name: 89055321

Synonym: Jann_2830

Alternate gene names: NA

Gene position: 2847363-2847788 (Clockwise)

Preceding gene: 89055320

Following gene: 89055322

Centisome position: 65.94

GC content: 61.03

Gene sequence:

>426_bases
ATGACCCGCACGATGCTTGTCACACGCTATGTCGCCTTCGCGATCATTGCCACGGTGGTGAACCTGTTCGTCCAACGAGT
CGTTCTATTGGGCGGCGACGGCGCGGGTTGGTTCGTCCTGGCGATGGGGATCGGGACGCTTGCGGGGCTGGTGGTGAAAT
ACGCCCTCGACAAGAAGTGGATCTTCTATGACCTCACCTCCGGCGCGGCGGCGCAGGGGCGGCAGTTTGGGCTCTATTCG
CTGATGGGGATCGTCACGACGGTGATCTTCTGGGCCACGGAAACCACGTTCTGGCTCATCTGGGGCACCGATTTCGCGCG
CGAGATCGGGGCGGTGATCGGCCTGACCATCGGCTATATCACCAAGTACCAGCTTGACCGTCGGTTCGTGTTCAAAGACG
CCATGTTCCGAGACACCGCGCCATGA

Upstream 100 bases:

>100_bases
GCGAGATGCACGACGATCCGATGATCTTCGCGGTCACAAATTCCACGTCGCGGCTGGTCATCCTGTTCTGCGCCATCATC
GTCTCGGGAGCAGTGCTGAT

Downstream 100 bases:

>100_bases
AGTTGAGCGGCTGGGGACGATTTCCAAACGTCGATTGCACCGTGCGCGTGGCCCGGTCGGAGGTTGACGTGCGCGCTGCC
GTTGCGGCCTCCCCCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTRTMLVTRYVAFAIIATVVNLFVQRVVLLGGDGAGWFVLAMGIGTLAGLVVKYALDKKWIFYDLTSGAAAQGRQFGLYS
LMGIVTTVIFWATETTFWLIWGTDFAREIGAVIGLTIGYITKYQLDRRFVFKDAMFRDTAP

Sequences:

>Translated_141_residues
MTRTMLVTRYVAFAIIATVVNLFVQRVVLLGGDGAGWFVLAMGIGTLAGLVVKYALDKKWIFYDLTSGAAAQGRQFGLYS
LMGIVTTVIFWATETTFWLIWGTDFAREIGAVIGLTIGYITKYQLDRRFVFKDAMFRDTAP
>Mature_140_residues
TRTMLVTRYVAFAIIATVVNLFVQRVVLLGGDGAGWFVLAMGIGTLAGLVVKYALDKKWIFYDLTSGAAAQGRQFGLYSL
MGIVTTVIFWATETTFWLIWGTDFAREIGAVIGLTIGYITKYQLDRRFVFKDAMFRDTAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15711; Mature: 15580

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTMLVTRYVAFAIIATVVNLFVQRVVLLGGDGAGWFVLAMGIGTLAGLVVKYALDKKW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
IFYDLTSGAAAQGRQFGLYSLMGIVTTVIFWATETTFWLIWGTDFAREIGAVIGLTIGYI
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH
TKYQLDRRFVFKDAMFRDTAP
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRTMLVTRYVAFAIIATVVNLFVQRVVLLGGDGAGWFVLAMGIGTLAGLVVKYALDKKW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
IFYDLTSGAAAQGRQFGLYSLMGIVTTVIFWATETTFWLIWGTDFAREIGAVIGLTIGYI
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH
TKYQLDRRFVFKDAMFRDTAP
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA