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The map label for this gene is ybgL [C]

Identifier: 89055293

GI number: 89055293

Start: 2815073

End: 2815894

Strand: Direct

Name: ybgL [C]

Synonym: Jann_2802

Alternate gene names: 89055293

Gene position: 2815073-2815894 (Clockwise)

Preceding gene: 89055288

Following gene: 89055294

Centisome position: 65.19

GC content: 63.38

Gene sequence:

>822_bases
ATGCGCTGCCGCTCCTTTAAACAGGGGGTTGAGTGTCCGCATGAAGGAGGCCCCATGGCCCGGTCCATTGATCTGAATTC
TGACCTGGGCGAAGGCTTCGGCCCCTGGTCCATGGGCGATGACGAGACCATGTTGGGGATCGTGACCAGTGCCAACATTG
CCTGTGGCGGCCACGCGAGCGATCCGGAAACCATGTATCAAACCCTTGTATCGGCGCACGAAAACGGCGTGATCGTGGGC
GCGCATCCCGGATATAATGATCGCGAAGGATTTGGCCGCCGCGTGATTCCAATGCAACCGGACGCCATCGCGCGGCTCTG
CGCGGCCCAGATCGGCGCGTTGCAGGGGGTGGCCGCGTTGGCGGGCACGCGCGTGGGTTACGTAAAGGCCCACGGCGCTT
TAGCCAACTTGTCGGCGCGTGACCGTGATGTCGCCGATGCCATCGTGGGCGCGGTTGCCGCGATTGACCCTAGCCTGCCG
ATCCTCGCAATTTCCGGGACCCAGACCGAACAGGCGGCCCGCGCGGCGGGACATCCGGTCTTCTCCGAGGTCTTCGCGGA
TCGTGGCTACCTGTCGTCGGGCCAATTGGTCCCGCGCGGCGAGGACGGCGCGATGATCCACGATGCCGATTTCGCCGCCG
ACAGGTTGCTGGAGCTTTTGGAGACCGGGCACATGCCTGTCATCGACGGCGCGCCTATTCCGCTGGAGGCGCATTCCATT
TGCGTGCATGGCGATAGCCCCGGCGCGGTCACAATGGCGTCAGCGATCCGCATGAAGCTCGTCTCGCAAGGCATTATGAT
CAAATCGTTTCTCTCCGCGTGA

Upstream 100 bases:

>100_bases
TCACGCCTGGTTCGATTCCAGGGTCGCCCACCATTCATTCCTCCCAGTTTGAACCGACACGCAAACACGCCCTGATCGGT
CCGTTGATCCCCCCTCGCGC

Downstream 100 bases:

>100_bases
CCGCAATGTTGTCCTTCAAGCCCGCGGGCGATACAGGCCTGCTTGTGACCGTCGCCGAAACGGCATCAGACGCGGCCAAT
GACCGGGTGATCGCCCTGGA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRCRSFKQGVECPHEGGPMARSIDLNSDLGEGFGPWSMGDDETMLGIVTSANIACGGHASDPETMYQTLVSAHENGVIVG
AHPGYNDREGFGRRVIPMQPDAIARLCAAQIGALQGVAALAGTRVGYVKAHGALANLSARDRDVADAIVGAVAAIDPSLP
ILAISGTQTEQAARAAGHPVFSEVFADRGYLSSGQLVPRGEDGAMIHDADFAADRLLELLETGHMPVIDGAPIPLEAHSI
CVHGDSPGAVTMASAIRMKLVSQGIMIKSFLSA

Sequences:

>Translated_273_residues
MRCRSFKQGVECPHEGGPMARSIDLNSDLGEGFGPWSMGDDETMLGIVTSANIACGGHASDPETMYQTLVSAHENGVIVG
AHPGYNDREGFGRRVIPMQPDAIARLCAAQIGALQGVAALAGTRVGYVKAHGALANLSARDRDVADAIVGAVAAIDPSLP
ILAISGTQTEQAARAAGHPVFSEVFADRGYLSSGQLVPRGEDGAMIHDADFAADRLLELLETGHMPVIDGAPIPLEAHSI
CVHGDSPGAVTMASAIRMKLVSQGIMIKSFLSA
>Mature_273_residues
MRCRSFKQGVECPHEGGPMARSIDLNSDLGEGFGPWSMGDDETMLGIVTSANIACGGHASDPETMYQTLVSAHENGVIVG
AHPGYNDREGFGRRVIPMQPDAIARLCAAQIGALQGVAALAGTRVGYVKAHGALANLSARDRDVADAIVGAVAAIDPSLP
ILAISGTQTEQAARAAGHPVFSEVFADRGYLSSGQLVPRGEDGAMIHDADFAADRLLELLETGHMPVIDGAPIPLEAHSI
CVHGDSPGAVTMASAIRMKLVSQGIMIKSFLSA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=39.4308943089431, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28350; Mature: 28350

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCRSFKQGVECPHEGGPMARSIDLNSDLGEGFGPWSMGDDETMLGIVTSANIACGGHAS
CCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCC
DPETMYQTLVSAHENGVIVGAHPGYNDREGFGRRVIPMQPDAIARLCAAQIGALQGVAAL
CHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AGTRVGYVKAHGALANLSARDRDVADAIVGAVAAIDPSLPILAISGTQTEQAARAAGHPV
HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCHH
FSEVFADRGYLSSGQLVPRGEDGAMIHDADFAADRLLELLETGHMPVIDGAPIPLEAHSI
HHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEECCCCCCCCCCEE
CVHGDSPGAVTMASAIRMKLVSQGIMIKSFLSA
EEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MRCRSFKQGVECPHEGGPMARSIDLNSDLGEGFGPWSMGDDETMLGIVTSANIACGGHAS
CCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCC
DPETMYQTLVSAHENGVIVGAHPGYNDREGFGRRVIPMQPDAIARLCAAQIGALQGVAAL
CHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AGTRVGYVKAHGALANLSARDRDVADAIVGAVAAIDPSLPILAISGTQTEQAARAAGHPV
HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCHH
FSEVFADRGYLSSGQLVPRGEDGAMIHDADFAADRLLELLETGHMPVIDGAPIPLEAHSI
HHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEECCCCCCCCCCEE
CVHGDSPGAVTMASAIRMKLVSQGIMIKSFLSA
EEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA