Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055259

Identifier: 89055259

GI number: 89055259

Start: 2784625

End: 2784984

Strand: Reverse

Name: 89055259

Synonym: Jann_2768

Alternate gene names: NA

Gene position: 2784984-2784625 (Counterclockwise)

Preceding gene: 89055260

Following gene: 89055258

Centisome position: 64.5

GC content: 55.56

Gene sequence:

>360_bases
ATGCGCTTCATCACGTTGATCGCCATTATCATCGTTGTGGCCTTGGGCAACTGGGCCTACCATCAGACAATCCAAACCCA
GATGACGGACCGTGACGTCAACCGTTTGCAGCGCGAAATCGTCAATGAACGCGAGCGTTTGGGGATATTGCGCGCGGAAT
GGGCTTATCTCAATCGACCCGACCGCCTCCGCGAATTGGCCGACTTCAACTTTGATCGCCTGGGCCTTTTGCCGCTGGCG
CCAAACCAATTTGGGGATGTGGCTCAGATCCCGTTCCCGTCGCCGATTGATGCCGCAGAAGACTTCATCCTTGAAAACTC
CTCCAACCCGCTTTGGGACGGAGAGATAGAGCCGCTATGA

Upstream 100 bases:

>100_bases
GCCCGCTCGGCCAAACTGCGCATCGCCACACGTACCGATGCGCCCGCGCAGCCCGTGGCGCCAGAGACCCTCGGGTTGCC
ACAATTGGAGGGTTTTTGAG

Downstream 100 bases:

>100_bases
CCCTTCGCATCCCACTCCGCCCGTTGACCCGCATTCTGGATGCCCGCGAACGGGGCGAAAACCCTGATAACGTTGAGAAA
GAGAACAAGCGCCTGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MRFITLIAIIIVVALGNWAYHQTIQTQMTDRDVNRLQREIVNERERLGILRAEWAYLNRPDRLRELADFNFDRLGLLPLA
PNQFGDVAQIPFPSPIDAAEDFILENSSNPLWDGEIEPL

Sequences:

>Translated_119_residues
MRFITLIAIIIVVALGNWAYHQTIQTQMTDRDVNRLQREIVNERERLGILRAEWAYLNRPDRLRELADFNFDRLGLLPLA
PNQFGDVAQIPFPSPIDAAEDFILENSSNPLWDGEIEPL
>Mature_119_residues
MRFITLIAIIIVVALGNWAYHQTIQTQMTDRDVNRLQREIVNERERLGILRAEWAYLNRPDRLRELADFNFDRLGLLPLA
PNQFGDVAQIPFPSPIDAAEDFILENSSNPLWDGEIEPL

Specific function: Unknown

COG id: COG5462

COG function: function code S; Predicted secreted (periplasmic) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13773; Mature: 13773

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFITLIAIIIVVALGNWAYHQTIQTQMTDRDVNRLQREIVNERERLGILRAEWAYLNRP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
DRLRELADFNFDRLGLLPLAPNQFGDVAQIPFPSPIDAAEDFILENSSNPLWDGEIEPL
HHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRFITLIAIIIVVALGNWAYHQTIQTQMTDRDVNRLQREIVNERERLGILRAEWAYLNRP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
DRLRELADFNFDRLGLLPLAPNQFGDVAQIPFPSPIDAAEDFILENSSNPLWDGEIEPL
HHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA