| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055236
Identifier: 89055236
GI number: 89055236
Start: 2758580
End: 2759719
Strand: Reverse
Name: 89055236
Synonym: Jann_2745
Alternate gene names: NA
Gene position: 2759719-2758580 (Counterclockwise)
Preceding gene: 89055237
Following gene: 89055224
Centisome position: 63.91
GC content: 67.19
Gene sequence:
>1140_bases TTGTGTCCGCTGCGGCCAGAAACGCAGAAATTTTCTTTGGCGAAAGCGGCTTGGAGCGGCATTGTTAACCCCATGATACT AAGGATTCTCTCAGCTCTCACCGTGTTGGCGCTCAGCACGCAAATGTCACTGGCCCAAGGGGCGGCGGGGCGGTTGCAAA CCATCCTGTCTGGCGTGCCGCAATCGGTCTTCGTTGGGGGGGAGGGGGCAATCGTCGCGGGCTTCGGCAACGGCGACGCG GTGCGCTGGATCGCCGTGCGCGGGGCCCAGGCCGGGCGCAACCCCAACACACCCAACCGCTTTGCGGCATTGCGCTCTGC CCCGCCAATGCAGCGCGATATCATCGACGGCACGCCGGACGCGGCGATCCGCGCGGCGGTCGGACTGACCGCGCTTGACT GGGTGCAGACCTGGGAAGTGGCGCAAGGCCCGGTCCGCGTGGGTGGCATGGACATCTTCCCCGACAGTGAAATGCGTCTG CGGGGCGCATTATTTTCCAACGGATTTATCGAGGATCAGCGCGGCGGTGCGCCGGTGATGTGGCTTGGCGATGCCGACTA CGCGCCTGACCCGGCCCGTGTCGATCCGGCCAATCCGTTTGGCGGCGACATGGGCCTGCCGATGCGGATCGTGTTTGAGG GCAACCGCGCGACCTGGGCCACGGGATGGGGTGCGCTTGACGCGGCCCGTGCGCCCTCCGGTCCCAACGTGGCCGCCCGG GCTGATGCGCAGGTGGTGTTGGGCGGTTTGCTTCGGGTGGGCAATCTTGGCGGTCTCGTCTCTGTGCGGTGTTGGTTGCG CAACGGAGCGGTGGTGCCGATTGCGGGGGCCGAAACCGGCCCCGTGGAGGCGTTGGCCCTGGCCGATTACGCCAACCGCG AGACGGAGGGCGCGGCCATGGTCCTCGCGCTCGCCGATGGTGTGGACGCCGACGCCCTCGCCGCCCGATTGCGAGACGCC TGGCCGATCCTCAGCACGCTGCCATCCCCGGCCGAGCCCGAGATCACATCCGGCGGGGGCTCCATCACTGTGACAATGCG CAGCGATTGGGGCGACGATGGCGCAGCCACCAACGCGGCCTATGAGGTCTTCCTGGATGCCTTGAACGGCGGTCGCCTCG GGTTCCTGCTGAACCGGTAG
Upstream 100 bases:
>100_bases GGTGGCCCGCCAGCGCTGGAGGGGGCATTGTTCCATGTTGACGCGCTGAAGGCCTACAACAAGGCTCTGGCCGCGACGGC AGCGGAGGAACACAGCTAAT
Downstream 100 bases:
>100_bases GCCCCGACGCCTACAGTTTCTCGACCGTAACCCGATCGGTGTAGAAGGCAATGTGTCCGGCGATTGCGCTGACGTCGGCG TTTGGATCCTCATAGCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MCPLRPETQKFSLAKAAWSGIVNPMILRILSALTVLALSTQMSLAQGAAGRLQTILSGVPQSVFVGGEGAIVAGFGNGDA VRWIAVRGAQAGRNPNTPNRFAALRSAPPMQRDIIDGTPDAAIRAAVGLTALDWVQTWEVAQGPVRVGGMDIFPDSEMRL RGALFSNGFIEDQRGGAPVMWLGDADYAPDPARVDPANPFGGDMGLPMRIVFEGNRATWATGWGALDAARAPSGPNVAAR ADAQVVLGGLLRVGNLGGLVSVRCWLRNGAVVPIAGAETGPVEALALADYANRETEGAAMVLALADGVDADALAARLRDA WPILSTLPSPAEPEITSGGGSITVTMRSDWGDDGAATNAAYEVFLDALNGGRLGFLLNR
Sequences:
>Translated_379_residues MCPLRPETQKFSLAKAAWSGIVNPMILRILSALTVLALSTQMSLAQGAAGRLQTILSGVPQSVFVGGEGAIVAGFGNGDA VRWIAVRGAQAGRNPNTPNRFAALRSAPPMQRDIIDGTPDAAIRAAVGLTALDWVQTWEVAQGPVRVGGMDIFPDSEMRL RGALFSNGFIEDQRGGAPVMWLGDADYAPDPARVDPANPFGGDMGLPMRIVFEGNRATWATGWGALDAARAPSGPNVAAR ADAQVVLGGLLRVGNLGGLVSVRCWLRNGAVVPIAGAETGPVEALALADYANRETEGAAMVLALADGVDADALAARLRDA WPILSTLPSPAEPEITSGGGSITVTMRSDWGDDGAATNAAYEVFLDALNGGRLGFLLNR >Mature_379_residues MCPLRPETQKFSLAKAAWSGIVNPMILRILSALTVLALSTQMSLAQGAAGRLQTILSGVPQSVFVGGEGAIVAGFGNGDA VRWIAVRGAQAGRNPNTPNRFAALRSAPPMQRDIIDGTPDAAIRAAVGLTALDWVQTWEVAQGPVRVGGMDIFPDSEMRL RGALFSNGFIEDQRGGAPVMWLGDADYAPDPARVDPANPFGGDMGLPMRIVFEGNRATWATGWGALDAARAPSGPNVAAR ADAQVVLGGLLRVGNLGGLVSVRCWLRNGAVVPIAGAETGPVEALALADYANRETEGAAMVLALADGVDADALAARLRDA WPILSTLPSPAEPEITSGGGSITVTMRSDWGDDGAATNAAYEVFLDALNGGRLGFLLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39346; Mature: 39346
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPLRPETQKFSLAKAAWSGIVNPMILRILSALTVLALSTQMSLAQGAAGRLQTILSGVP CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC QSVFVGGEGAIVAGFGNGDAVRWIAVRGAQAGRNPNTPNRFAALRSAPPMQRDIIDGTPD CEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCC AAIRAAVGLTALDWVQTWEVAQGPVRVGGMDIFPDSEMRLRGALFSNGFIEDQRGGAPVM HHHHHHHCCHHHHHHHHHHHCCCCEEECCEEECCCCCHHEEEHHHCCCCEECCCCCCCEE WLGDADYAPDPARVDPANPFGGDMGLPMRIVFEGNRATWATGWGALDAARAPSGPNVAAR EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCHHCCCCCCCCEEEC ADAQVVLGGLLRVGNLGGLVSVRCWLRNGAVVPIAGAETGPVEALALADYANRETEGAAM CCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEHHHCCCCCCCCEE VLALADGVDADALAARLRDAWPILSTLPSPAEPEITSGGGSITVTMRSDWGDDGAATNAA EEEEECCCCHHHHHHHHHHHCHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCHHH YEVFLDALNGGRLGFLLNR HHHHHHHCCCCEEEEEECC >Mature Secondary Structure MCPLRPETQKFSLAKAAWSGIVNPMILRILSALTVLALSTQMSLAQGAAGRLQTILSGVP CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC QSVFVGGEGAIVAGFGNGDAVRWIAVRGAQAGRNPNTPNRFAALRSAPPMQRDIIDGTPD CEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCC AAIRAAVGLTALDWVQTWEVAQGPVRVGGMDIFPDSEMRLRGALFSNGFIEDQRGGAPVM HHHHHHHCCHHHHHHHHHHHCCCCEEECCEEECCCCCHHEEEHHHCCCCEECCCCCCCEE WLGDADYAPDPARVDPANPFGGDMGLPMRIVFEGNRATWATGWGALDAARAPSGPNVAAR EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCHHCCCCCCCCEEEC ADAQVVLGGLLRVGNLGGLVSVRCWLRNGAVVPIAGAETGPVEALALADYANRETEGAAM CCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEHHHCCCCCCCCEE VLALADGVDADALAARLRDAWPILSTLPSPAEPEITSGGGSITVTMRSDWGDDGAATNAA EEEEECCCCHHHHHHHHHHHCHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCHHH YEVFLDALNGGRLGFLLNR HHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA