| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055223
Identifier: 89055223
GI number: 89055223
Start: 2745744
End: 2746199
Strand: Reverse
Name: 89055223
Synonym: Jann_2732
Alternate gene names: NA
Gene position: 2746199-2745744 (Counterclockwise)
Preceding gene: 89055224
Following gene: 89055222
Centisome position: 63.6
GC content: 64.91
Gene sequence:
>456_bases GTGACCTCTGGCCGGTTCATTGTCTTCGTGATCCTTGGGGTTACGGCTGTTTTCGGGGCGACCCTGTGGTGGGCGAACAC GCGCGCCTATTACGCGCCTTTGGAGGTTGTCGAAATCGCCGTCCAGCGGCCTGACGGGGCGTTGGTGCCCTTGGAGATTG TGGATGCGGAGGGGATTGACGCCACAACGTCCCCCCTCCGCTTCCGGGCCTGTTTCACGTTGTCCGACGATGCTCCCCTC GCGGATGCCGCCCCCTACGACGATGCCACGCCCTTGATCCCGCCCGCCTGGTTCGACTGCTTCGACGCCACCCAAATCGG CGAAGCACTGGAGGCGGGTGAAGCGCAGGCCTATCTGGGCCAACGCAACGCATCGCGCGGCGTGGACCGCGTGGTGGCGA TCTTTCCCGACGGGCGCGGCTACGCCTGGACGCAACTCAACGGCACTTTGGAGTAA
Upstream 100 bases:
>100_bases CCGTGACCGAGCGCCAGGCCTATATCGGCCGTGTCCGCACGCTGACCAAAAAATGCGCCGATGCGTTCGTGCAGACGGCC GCTGGCGGGGCAGAGGTGGC
Downstream 100 bases:
>100_bases GTCCCATGCCTGATCTTTTGCTGGAACTCTTTTCCGAGGAAATCCCCGCCCGGATGCAGGCGCGCGCGAGCGCTGATGTG AAGCGTCTGGTGACCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTSGRFIVFVILGVTAVFGATLWWANTRAYYAPLEVVEIAVQRPDGALVPLEIVDAEGIDATTSPLRFRACFTLSDDAPL ADAAPYDDATPLIPPAWFDCFDATQIGEALEAGEAQAYLGQRNASRGVDRVVAIFPDGRGYAWTQLNGTLE
Sequences:
>Translated_151_residues MTSGRFIVFVILGVTAVFGATLWWANTRAYYAPLEVVEIAVQRPDGALVPLEIVDAEGIDATTSPLRFRACFTLSDDAPL ADAAPYDDATPLIPPAWFDCFDATQIGEALEAGEAQAYLGQRNASRGVDRVVAIFPDGRGYAWTQLNGTLE >Mature_150_residues TSGRFIVFVILGVTAVFGATLWWANTRAYYAPLEVVEIAVQRPDGALVPLEIVDAEGIDATTSPLRFRACFTLSDDAPLA DAAPYDDATPLIPPAWFDCFDATQIGEALEAGEAQAYLGQRNASRGVDRVVAIFPDGRGYAWTQLNGTLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16284; Mature: 16153
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGRFIVFVILGVTAVFGATLWWANTRAYYAPLEVVEIAVQRPDGALVPLEIVDAEGID CCCCCEEEHHHHHHHHHHHHHHEECCCCEEECHHHEEEEEEECCCCCEEEEEEECCCCCC ATTSPLRFRACFTLSDDAPLADAAPYDDATPLIPPAWFDCFDATQIGEALEAGEAQAYLG CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHC QRNASRGVDRVVAIFPDGRGYAWTQLNGTLE CCCCCCCCCEEEEEEECCCCEEEEEECCCCC >Mature Secondary Structure TSGRFIVFVILGVTAVFGATLWWANTRAYYAPLEVVEIAVQRPDGALVPLEIVDAEGID CCCCEEEHHHHHHHHHHHHHHEECCCCEEECHHHEEEEEEECCCCCEEEEEEECCCCCC ATTSPLRFRACFTLSDDAPLADAAPYDDATPLIPPAWFDCFDATQIGEALEAGEAQAYLG CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHC QRNASRGVDRVVAIFPDGRGYAWTQLNGTLE CCCCCCCCCEEEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA