Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055219

Identifier: 89055219

GI number: 89055219

Start: 2738985

End: 2739923

Strand: Reverse

Name: 89055219

Synonym: Jann_2728

Alternate gene names: NA

Gene position: 2739923-2738985 (Counterclockwise)

Preceding gene: 89055220

Following gene: 89055217

Centisome position: 63.45

GC content: 63.37

Gene sequence:

>939_bases
ATGACCGACGAAATACATCAAGCCTTCAGCCATCCAACGGAGCGCGCGAAAGCCACGTCCCAAGGGGCGCCGCGCGATCG
CATCTCCATGACGGATCATGTTCGAGACGTCGAAATCGGCGCGTTTCAGGCCGAACGCGGCATCACCCAGAAAATCCAGT
TCGATGTCGTGGTGGAGGTCGAAACCCGTGCGGAAAGCGCGACAGATGACGTGGATCGTATCCTCAGCTACGACACCATT
TCCGAGGCGATTGACGTGGCCTTGGCCGCTGAACGGGTCAATCTTCTGGAAACGCTGGCCGCGCGGATCGCCGATAGCAT
TCTGGAGCATCCGCTGGCGGCCCGTGTTTTTGTGCGCATCGGCAAGCTGGACCGGGGGCCTTACACGCTGGGGGTGGAGA
TTTTGCGCGCGGCTCCGGAAGGCCGCCGCCGTCTGCGCCTTCTGGCCGAGGCTGCGCCGCACCCCATTGTTGTTCATCTC
TCGGACAAAGCCATCCATCGCCCTGATATACCGGACCTTTTGGACAGGCTGGAGCAGGCGGAGGCTCCGCTGATCCTCTG
TGTTGATGCGCCACGATTGCCAATTCCCCAAGCCGCCCATGCCATGCCACAGCGCCGCATCGCGCTTCTGGCGATCGAGC
AATCGGCCTGGGTCCTTGCGGCGCGGGATCCGCGCTGTGTGGTGGTCGACAGCCGGACCGAGCTGGACTGGGCGATGCGG
CAAGGCAAGATCAGCGTTTGGGCGCCGTCCAAGCTGGTATTGGACGCGGTCGAAGGGCCGGATGCGGACGTGACCGATCC
CGTCGCGCTCACTTTGTGGCTGGCCGATGCGTTTGAGGCGCAGCGCGTGATCACCTTGGGCGGGGCGGCTTTGGACGGCG
TGGATGCGTTCGCCGCCGACGCGCGGCCTGACCTGATCTCAGTTAAGGCGCATCAATAG

Upstream 100 bases:

>100_bases
TGATCCCGCTTCGGATTTGGTTCGGCATACGCCGCATGCGGGCGCTGTTTGCGCGGGCGTGCTGTGGTAGCAGGGCGCGA
CACCAGTTTGGGGCGTGCCA

Downstream 100 bases:

>100_bases
ATCCGGGCCATCGCTCTCGGCGACCACGAAACCGGCTTTCTCCATCACCCGGCGCGACGCGATTTCATCGGGTTGCGTGA
AGCCGAAAAACCGCGTTTCC

Product: dihydroneopterin aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTDEIHQAFSHPTERAKATSQGAPRDRISMTDHVRDVEIGAFQAERGITQKIQFDVVVEVETRAESATDDVDRILSYDTI
SEAIDVALAAERVNLLETLAARIADSILEHPLAARVFVRIGKLDRGPYTLGVEILRAAPEGRRRLRLLAEAAPHPIVVHL
SDKAIHRPDIPDLLDRLEQAEAPLILCVDAPRLPIPQAAHAMPQRRIALLAIEQSAWVLAARDPRCVVVDSRTELDWAMR
QGKISVWAPSKLVLDAVEGPDADVTDPVALTLWLADAFEAQRVITLGGAALDGVDAFAADARPDLISVKAHQ

Sequences:

>Translated_312_residues
MTDEIHQAFSHPTERAKATSQGAPRDRISMTDHVRDVEIGAFQAERGITQKIQFDVVVEVETRAESATDDVDRILSYDTI
SEAIDVALAAERVNLLETLAARIADSILEHPLAARVFVRIGKLDRGPYTLGVEILRAAPEGRRRLRLLAEAAPHPIVVHL
SDKAIHRPDIPDLLDRLEQAEAPLILCVDAPRLPIPQAAHAMPQRRIALLAIEQSAWVLAARDPRCVVVDSRTELDWAMR
QGKISVWAPSKLVLDAVEGPDADVTDPVALTLWLADAFEAQRVITLGGAALDGVDAFAADARPDLISVKAHQ
>Mature_311_residues
TDEIHQAFSHPTERAKATSQGAPRDRISMTDHVRDVEIGAFQAERGITQKIQFDVVVEVETRAESATDDVDRILSYDTIS
EAIDVALAAERVNLLETLAARIADSILEHPLAARVFVRIGKLDRGPYTLGVEILRAAPEGRRRLRLLAEAAPHPIVVHLS
DKAIHRPDIPDLLDRLEQAEAPLILCVDAPRLPIPQAAHAMPQRRIALLAIEQSAWVLAARDPRCVVVDSRTELDWAMRQ
GKISVWAPSKLVLDAVEGPDADVTDPVALTLWLADAFEAQRVITLGGAALDGVDAFAADARPDLISVKAHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34127; Mature: 33996

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEIHQAFSHPTERAKATSQGAPRDRISMTDHVRDVEIGAFQAERGITQKIQFDVVVEV
CCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCEECCEEHHCCCCEEEEEEEEEEE
ETRAESATDDVDRILSYDTISEAIDVALAAERVNLLETLAARIADSILEHPLAARVFVRI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
GKLDRGPYTLGVEILRAAPEGRRRLRLLAEAAPHPIVVHLSDKAIHRPDIPDLLDRLEQA
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHC
EAPLILCVDAPRLPIPQAAHAMPQRRIALLAIEQSAWVLAARDPRCVVVDSRTELDWAMR
CCCEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCHHHHHH
QGKISVWAPSKLVLDAVEGPDADVTDPVALTLWLADAFEAQRVITLGGAALDGVDAFAAD
CCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEHHHHHCCCEEEEECCCHHCCHHHHHCC
ARPDLISVKAHQ
CCCCEEEEECCC
>Mature Secondary Structure 
TDEIHQAFSHPTERAKATSQGAPRDRISMTDHVRDVEIGAFQAERGITQKIQFDVVVEV
CHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCEECCEEHHCCCCEEEEEEEEEEE
ETRAESATDDVDRILSYDTISEAIDVALAAERVNLLETLAARIADSILEHPLAARVFVRI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
GKLDRGPYTLGVEILRAAPEGRRRLRLLAEAAPHPIVVHLSDKAIHRPDIPDLLDRLEQA
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHC
EAPLILCVDAPRLPIPQAAHAMPQRRIALLAIEQSAWVLAARDPRCVVVDSRTELDWAMR
CCCEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCHHHHHH
QGKISVWAPSKLVLDAVEGPDADVTDPVALTLWLADAFEAQRVITLGGAALDGVDAFAAD
CCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEHHHHHCCCEEEEECCCHHCCHHHHHCC
ARPDLISVKAHQ
CCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA