| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055209
Identifier: 89055209
GI number: 89055209
Start: 2726673
End: 2727227
Strand: Reverse
Name: 89055209
Synonym: Jann_2718
Alternate gene names: NA
Gene position: 2727227-2726673 (Counterclockwise)
Preceding gene: 89055210
Following gene: 89055204
Centisome position: 63.16
GC content: 62.16
Gene sequence:
>555_bases TTGAGACACGTTGTATCAGCGCTGATCTTCGCCGGCCTTGCTTGCGCCATGCCCCTTGCCGCGCAGCAATTCGATGTTAT CGACGGCGTCGGAGGGTTTGATGGATTCGAGCTTGATATGGGCGACGAGGACGGCACGGGCCTGACCCTGTCGGAGGGGG CAGATACCGGCGATATCCAGTTAAACCTGGGCACCGGGGCGGCAGGCACGTTCGAGACATTCCCTGGCGTGACGGGCCCT GTGACCTCCATCAGCCAGCCCGCGACGGAGGTTGGGACGACCGTCTCGCTCCGCGCGCTCGACAAGATGTTGGGGCAACC CACGGATATCGAGCTGTCGATGGGTCAGACAGTGGTCTTTGGCCGTGTCGCGATCCGGGTGATCGAATGCCGCTATCCCG CCGCAGACCCGGGCGGCGATGCCTTTGCGCTGCTTGAGGTGCTGAATATGGAAGGCGAGACGCTTTTTGACGGATGGATG ATCGCGTCCAGCCCGGCCCTGAATGCGTTGGAGCATTCCCGCTACGACGTCTGGGTTTTGGGCTGTTCGGCGTAA
Upstream 100 bases:
>100_bases CACCGTTCAATCTGGAGGCGGGTGGCGAGATCCTGGACACCCAATCCTCGGTCGGCCTGGCCACGCTATTATTACGGTTT GTGAGCGGAGCGGCAGACAA
Downstream 100 bases:
>100_bases CCTAGACGACCAGCGGGACGTCTTCCGGCAATGACATGAAATCGGCAGGTAGTTGCAACGCATGGCTCAACTCGGCCCGG TAGTCCGACCGGGGCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MRHVVSALIFAGLACAMPLAAQQFDVIDGVGGFDGFELDMGDEDGTGLTLSEGADTGDIQLNLGTGAAGTFETFPGVTGP VTSISQPATEVGTTVSLRALDKMLGQPTDIELSMGQTVVFGRVAIRVIECRYPAADPGGDAFALLEVLNMEGETLFDGWM IASSPALNALEHSRYDVWVLGCSA
Sequences:
>Translated_184_residues MRHVVSALIFAGLACAMPLAAQQFDVIDGVGGFDGFELDMGDEDGTGLTLSEGADTGDIQLNLGTGAAGTFETFPGVTGP VTSISQPATEVGTTVSLRALDKMLGQPTDIELSMGQTVVFGRVAIRVIECRYPAADPGGDAFALLEVLNMEGETLFDGWM IASSPALNALEHSRYDVWVLGCSA >Mature_184_residues MRHVVSALIFAGLACAMPLAAQQFDVIDGVGGFDGFELDMGDEDGTGLTLSEGADTGDIQLNLGTGAAGTFETFPGVTGP VTSISQPATEVGTTVSLRALDKMLGQPTDIELSMGQTVVFGRVAIRVIECRYPAADPGGDAFALLEVLNMEGETLFDGWM IASSPALNALEHSRYDVWVLGCSA
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19148; Mature: 19148
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVVSALIFAGLACAMPLAAQQFDVIDGVGGFDGFELDMGDEDGTGLTLSEGADTGDIQ CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCEEE LNLGTGAAGTFETFPGVTGPVTSISQPATEVGTTVSLRALDKMLGQPTDIELSMGQTVVF EEECCCCCCCHHHCCCCCCCCCCCCCCHHHHCCEEHHHHHHHHHCCCCCEEEECCCEEEE GRVAIRVIECRYPAADPGGDAFALLEVLNMEGETLFDGWMIASSPALNALEHSRYDVWVL HHEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCEEEECCCHHHHHHCCCCEEEEE GCSA EECC >Mature Secondary Structure MRHVVSALIFAGLACAMPLAAQQFDVIDGVGGFDGFELDMGDEDGTGLTLSEGADTGDIQ CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCEEE LNLGTGAAGTFETFPGVTGPVTSISQPATEVGTTVSLRALDKMLGQPTDIELSMGQTVVF EEECCCCCCCHHHCCCCCCCCCCCCCCHHHHCCEEHHHHHHHHHCCCCCEEEECCCEEEE GRVAIRVIECRYPAADPGGDAFALLEVLNMEGETLFDGWMIASSPALNALEHSRYDVWVL HHEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCEEEECCCHHHHHHCCCCEEEEE GCSA EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA