Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055179

Identifier: 89055179

GI number: 89055179

Start: 2698262

End: 2698801

Strand: Reverse

Name: 89055179

Synonym: Jann_2688

Alternate gene names: NA

Gene position: 2698801-2698262 (Counterclockwise)

Preceding gene: 89055180

Following gene: 89055177

Centisome position: 62.5

GC content: 65.37

Gene sequence:

>540_bases
ATGATCGCGGTCATCGACGCCTGCGCGCTGTATCCGACCGTGCTGCGTCAGATCCTGTTGGGTTGCGCGGAGCAGGATAT
GTTCACCCCGATCTGGTCTGACCGTCTGCTGGAGGAATGGGCGCGGGCGGCTGCGCGCAATGGCGGGCCACAGGACGAAC
AGATCGCGCGGGCAGAGGCGGTGTCGGCCAACCTCCGCTTTCCGGACGCCGTCGTCGCGCCGGGGGACGAGGCTCCGCTG
TGGTTGCCTGATCCGGCTGATATTCACGTGCTGGCGACTGCGATAAAGGGCGGGGCAGAGGCGATCATCACGATGAACTT
GAAGGATTTTCCGCGACGGGAACTGGCGGGGCACGGCATTGCCGCGATCGCTCCGGATGCGTTTCTGATGGATCTTTGGC
TGGAGCATGAGGCGGACGTGACCCGCGCCGTCACCAAAACCCATGCGGAGGCCGAGCGTCTTTCGGGGCAAACGCTCCCC
TTGCGCGCTCTGCTCAAACGCGCGCGGCTGCCTCGGTTGGGCAAGGCGCTGACGCGTTAG

Upstream 100 bases:

>100_bases
GCGAGCCGCGCATCATCAATACCGGGTTTGCGGGGCCGGATCATCCGGTCCATCCCAGCCTGAGCGACACGGGCTACCTG
AAGGCCCTCGCGTTCCACTT

Downstream 100 bases:

>100_bases
CCGGGGTTACTCCGACGGCAATTCAGTGCGCCAGCGGGCCTCCATCGCTTCAATCGCGGCAATCCGGTCTGCGGTTTTGG
GGTGGCTCATCAACCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIAVIDACALYPTVLRQILLGCAEQDMFTPIWSDRLLEEWARAAARNGGPQDEQIARAEAVSANLRFPDAVVAPGDEAPL
WLPDPADIHVLATAIKGGAEAIITMNLKDFPRRELAGHGIAAIAPDAFLMDLWLEHEADVTRAVTKTHAEAERLSGQTLP
LRALLKRARLPRLGKALTR

Sequences:

>Translated_179_residues
MIAVIDACALYPTVLRQILLGCAEQDMFTPIWSDRLLEEWARAAARNGGPQDEQIARAEAVSANLRFPDAVVAPGDEAPL
WLPDPADIHVLATAIKGGAEAIITMNLKDFPRRELAGHGIAAIAPDAFLMDLWLEHEADVTRAVTKTHAEAERLSGQTLP
LRALLKRARLPRLGKALTR
>Mature_179_residues
MIAVIDACALYPTVLRQILLGCAEQDMFTPIWSDRLLEEWARAAARNGGPQDEQIARAEAVSANLRFPDAVVAPGDEAPL
WLPDPADIHVLATAIKGGAEAIITMNLKDFPRRELAGHGIAAIAPDAFLMDLWLEHEADVTRAVTKTHAEAERLSGQTLP
LRALLKRARLPRLGKALTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19514; Mature: 19514

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVIDACALYPTVLRQILLGCAEQDMFTPIWSDRLLEEWARAAARNGGPQDEQIARAEA
CEEEHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VSANLRFPDAVVAPGDEAPLWLPDPADIHVLATAIKGGAEAIITMNLKDFPRRELAGHGI
HHCCCCCCCCEECCCCCCCEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCC
AAIAPDAFLMDLWLEHEADVTRAVTKTHAEAERLSGQTLPLRALLKRARLPRLGKALTR
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MIAVIDACALYPTVLRQILLGCAEQDMFTPIWSDRLLEEWARAAARNGGPQDEQIARAEA
CEEEHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VSANLRFPDAVVAPGDEAPLWLPDPADIHVLATAIKGGAEAIITMNLKDFPRRELAGHGI
HHCCCCCCCCEECCCCCCCEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCC
AAIAPDAFLMDLWLEHEADVTRAVTKTHAEAERLSGQTLPLRALLKRARLPRLGKALTR
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA