| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is expG [H]
Identifier: 89055142
GI number: 89055142
Start: 2664983
End: 2665480
Strand: Reverse
Name: expG [H]
Synonym: Jann_2651
Alternate gene names: 89055142
Gene position: 2665480-2664983 (Counterclockwise)
Preceding gene: 89055143
Following gene: 89055137
Centisome position: 61.73
GC content: 58.03
Gene sequence:
>498_bases ATGAGTATGCACGCGCCCCTTGCCTCGCCAACCCAGACCGGGTTTCTGGCAGGCTATCTGGAATCCCTTGCCATGGTGGA GCGCCTGCATCGGCTGCTGCTCGACGTGATCAAGGACGAATTTGAACGTTTGGGGGTGCTTGATATCAACGCCGTCCAGG CCCTGTTGCTGTTCAATATCGGCGACAATGAGGTGACGGCTGGCGAGTTGAAATCGCGCGGCTATTATCAGGGCTCCAAC GTCAGCTACAACCTCAAGAAGCTGGTGGACATGGGCTATATGCATCACCAGAAGTGTGAGATTGACCGCCGCTCGGTTCG GGTGCGCCTGACCGAAAAGGGCCGCCATGTGCGCGACACCGTGGACGGTCTATTCGAGCGGCACTCGGAAGGTCTGGAGA AGCAGGGCGTGATGAGCGCGGATGGCGTGGACCGCCTGAACCACTCCCTCAAGCGGATAGAGCGGTTCTGGTCGGATCAG ATTCGCTACATTTACTAA
Upstream 100 bases:
>100_bases TCTTGTAAGGGCTTATTCGCAAACGATCTTTTGGCGCTTAACGGAATGTTCGTGTTTTTCCCCGAATCTACAGCGAAAGC AGTGATTGCGGAGTTAAATA
Downstream 100 bases:
>100_bases GCTGGATTTGGCGGACGTGGACCGGGGCAGAGGCGGCGATCCTCATCCCCGACTGCGTCGCCTCCACTCCGGGGATCGAC AGTAAACCGGGAACCGACAG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSMHAPLASPTQTGFLAGYLESLAMVERLHRLLLDVIKDEFERLGVLDINAVQALLLFNIGDNEVTAGELKSRGYYQGSN VSYNLKKLVDMGYMHHQKCEIDRRSVRVRLTEKGRHVRDTVDGLFERHSEGLEKQGVMSADGVDRLNHSLKRIERFWSDQ IRYIY
Sequences:
>Translated_165_residues MSMHAPLASPTQTGFLAGYLESLAMVERLHRLLLDVIKDEFERLGVLDINAVQALLLFNIGDNEVTAGELKSRGYYQGSN VSYNLKKLVDMGYMHHQKCEIDRRSVRVRLTEKGRHVRDTVDGLFERHSEGLEKQGVMSADGVDRLNHSLKRIERFWSDQ IRYIY >Mature_164_residues SMHAPLASPTQTGFLAGYLESLAMVERLHRLLLDVIKDEFERLGVLDINAVQALLLFNIGDNEVTAGELKSRGYYQGSNV SYNLKKLVDMGYMHHQKCEIDRRSVRVRLTEKGRHVRDTVDGLFERHSEGLEKQGVMSADGVDRLNHSLKRIERFWSDQI RYIY
Specific function: Transcriptional activator of genes for galactoglucan synthesis (exopolysaccharide II or EPS II) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18995; Mature: 18864
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMHAPLASPTQTGFLAGYLESLAMVERLHRLLLDVIKDEFERLGVLDINAVQALLLFNI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC GDNEVTAGELKSRGYYQGSNVSYNLKKLVDMGYMHHQKCEIDRRSVRVRLTEKGRHVRDT CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHH VDGLFERHSEGLEKQGVMSADGVDRLNHSLKRIERFWSDQIRYIY HHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure SMHAPLASPTQTGFLAGYLESLAMVERLHRLLLDVIKDEFERLGVLDINAVQALLLFNI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC GDNEVTAGELKSRGYYQGSNVSYNLKKLVDMGYMHHQKCEIDRRSVRVRLTEKGRHVRDT CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHH VDGLFERHSEGLEKQGVMSADGVDRLNHSLKRIERFWSDQIRYIY HHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672816; 9023225; 9501442; 11481431 [H]