| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055135
Identifier: 89055135
GI number: 89055135
Start: 2657535
End: 2658236
Strand: Reverse
Name: 89055135
Synonym: Jann_2644
Alternate gene names: NA
Gene position: 2658236-2657535 (Counterclockwise)
Preceding gene: 89055136
Following gene: 89055131
Centisome position: 61.56
GC content: 64.81
Gene sequence:
>702_bases ATGACCCACCGCTTCGGTATTTTCTGCGCAGCTGCGCTGACGGCGCTCGCGACGCCTGTTGTGGCCGATGGCCCCGTGGT GGTGGAATTGTTCACCTCGCAGGGGTGTTCGTCCTGTCCGCCCGCAGATGAGTTGCTGGGGGAGCTGGCCGGGCGCGATG ACATTATCGCGTTGGCGCTGCACGTCGATTACTGGGATTATATCGGGTGGGCCGATACCTTCGCCCAAAGCGCATTTTCG CAGCGCCAGCAGAACTACGGCCACGCGGCCGGGTCCACTGTTGTCTATACGCCGCAGATGGTGATCGGCGGCGTGGACCA TGTGATCGGCAACCGCGCGATGGATGTGGTCGACACAATCGCCGCGCACCGGGGTGTCGCCAGCCCGGTCGAGATCGCCG CGACACCGGCCCAGGACGGCTGGCAAGTGCGGGCGGTCTGGGTGGGTGATAGCCAGGCCCCGGCCATGATCGTGCAGGTC GTGACCTATTCACCTGAGGAGCACGTCGATATTGAACGGGGCGAAAACGCGGGCTTGTCAACGGTTTACCACAATGTGGT GCGGTCGTGGCAGGTCGTCTCGGACTGGGCCGGAGAGGCCGCGTTCGAAGCCCAGGTGTCGCCCGTCGCCGATATGGCCC ATGTGGTGATCGTGCAGACCGATGGTCACGGCGCGATCCTGGGAGCCGCCCGGCTCGACTGA
Upstream 100 bases:
>100_bases TTGCATTGTCACAGAGTCTCGCGAACGCTTGATTGGCCATCGACGTCCATATGAACTAGCTAAGATCAAACATGACGACA CAGGCACGGACATCAATCCC
Downstream 100 bases:
>100_bases GGCCCGGACCGCGTCTAACCGGCCGCGGTCGCGCGGTTTTCGCGATACCAGACATAGACGCCGGCCCCCACAATCACCAT CGCCCCGAGGAGCGTCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTHRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALALHVDYWDYIGWADTFAQSAFS QRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTIAAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQV VTYSPEEHVDIERGENAGLSTVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD
Sequences:
>Translated_233_residues MTHRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALALHVDYWDYIGWADTFAQSAFS QRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTIAAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQV VTYSPEEHVDIERGENAGLSTVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD >Mature_232_residues THRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALALHVDYWDYIGWADTFAQSAFSQ RQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTIAAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQVV TYSPEEHVDIERGENAGLSTVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD
Specific function: Unknown
COG id: COG5429
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24693; Mature: 24562
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALAL CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEE HVDYWDYIGWADTFAQSAFSQRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTI EECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHCCHHHHHHHHH AAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQVVTYSPEEHVDIERGENAGLS HHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCCCCCCCHH TVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD HHHHHHHHHHHHHHHHCCCCCHHCCCCCHHCCEEEEEEEECCCCEEEEEEECC >Mature Secondary Structure THRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALAL CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEE HVDYWDYIGWADTFAQSAFSQRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTI EECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHCCHHHHHHHHH AAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQVVTYSPEEHVDIERGENAGLS HHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCCCCCCCHH TVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD HHHHHHHHHHHHHHHHCCCCCHHCCCCCHHCCEEEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA