Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055135

Identifier: 89055135

GI number: 89055135

Start: 2657535

End: 2658236

Strand: Reverse

Name: 89055135

Synonym: Jann_2644

Alternate gene names: NA

Gene position: 2658236-2657535 (Counterclockwise)

Preceding gene: 89055136

Following gene: 89055131

Centisome position: 61.56

GC content: 64.81

Gene sequence:

>702_bases
ATGACCCACCGCTTCGGTATTTTCTGCGCAGCTGCGCTGACGGCGCTCGCGACGCCTGTTGTGGCCGATGGCCCCGTGGT
GGTGGAATTGTTCACCTCGCAGGGGTGTTCGTCCTGTCCGCCCGCAGATGAGTTGCTGGGGGAGCTGGCCGGGCGCGATG
ACATTATCGCGTTGGCGCTGCACGTCGATTACTGGGATTATATCGGGTGGGCCGATACCTTCGCCCAAAGCGCATTTTCG
CAGCGCCAGCAGAACTACGGCCACGCGGCCGGGTCCACTGTTGTCTATACGCCGCAGATGGTGATCGGCGGCGTGGACCA
TGTGATCGGCAACCGCGCGATGGATGTGGTCGACACAATCGCCGCGCACCGGGGTGTCGCCAGCCCGGTCGAGATCGCCG
CGACACCGGCCCAGGACGGCTGGCAAGTGCGGGCGGTCTGGGTGGGTGATAGCCAGGCCCCGGCCATGATCGTGCAGGTC
GTGACCTATTCACCTGAGGAGCACGTCGATATTGAACGGGGCGAAAACGCGGGCTTGTCAACGGTTTACCACAATGTGGT
GCGGTCGTGGCAGGTCGTCTCGGACTGGGCCGGAGAGGCCGCGTTCGAAGCCCAGGTGTCGCCCGTCGCCGATATGGCCC
ATGTGGTGATCGTGCAGACCGATGGTCACGGCGCGATCCTGGGAGCCGCCCGGCTCGACTGA

Upstream 100 bases:

>100_bases
TTGCATTGTCACAGAGTCTCGCGAACGCTTGATTGGCCATCGACGTCCATATGAACTAGCTAAGATCAAACATGACGACA
CAGGCACGGACATCAATCCC

Downstream 100 bases:

>100_bases
GGCCCGGACCGCGTCTAACCGGCCGCGGTCGCGCGGTTTTCGCGATACCAGACATAGACGCCGGCCCCCACAATCACCAT
CGCCCCGAGGAGCGTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTHRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALALHVDYWDYIGWADTFAQSAFS
QRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTIAAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQV
VTYSPEEHVDIERGENAGLSTVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD

Sequences:

>Translated_233_residues
MTHRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALALHVDYWDYIGWADTFAQSAFS
QRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTIAAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQV
VTYSPEEHVDIERGENAGLSTVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD
>Mature_232_residues
THRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALALHVDYWDYIGWADTFAQSAFSQ
RQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTIAAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQVV
TYSPEEHVDIERGENAGLSTVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD

Specific function: Unknown

COG id: COG5429

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24693; Mature: 24562

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALAL
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEE
HVDYWDYIGWADTFAQSAFSQRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTI
EECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHCCHHHHHHHHH
AAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQVVTYSPEEHVDIERGENAGLS
HHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCCCCCCCHH
TVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD
HHHHHHHHHHHHHHHHCCCCCHHCCCCCHHCCEEEEEEEECCCCEEEEEEECC
>Mature Secondary Structure 
THRFGIFCAAALTALATPVVADGPVVVELFTSQGCSSCPPADELLGELAGRDDIIALAL
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEE
HVDYWDYIGWADTFAQSAFSQRQQNYGHAAGSTVVYTPQMVIGGVDHVIGNRAMDVVDTI
EECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHCCHHHHHHHHH
AAHRGVASPVEIAATPAQDGWQVRAVWVGDSQAPAMIVQVVTYSPEEHVDIERGENAGLS
HHHCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCCCCCCCHH
TVYHNVVRSWQVVSDWAGEAAFEAQVSPVADMAHVVIVQTDGHGAILGAARLD
HHHHHHHHHHHHHHHHCCCCCHHCCCCCHHCCEEEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA