| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055112
Identifier: 89055112
GI number: 89055112
Start: 2640231
End: 2640548
Strand: Direct
Name: 89055112
Synonym: Jann_2621
Alternate gene names: NA
Gene position: 2640231-2640548 (Clockwise)
Preceding gene: 89055111
Following gene: 89055113
Centisome position: 61.15
GC content: 60.38
Gene sequence:
>318_bases ATGAGCGATACCAACCCCGTCTACATGATCGTGATGCTCGAAATCGACGATATGCCGACCTTCTTTGAGGATTATGCCAA CCCGTTGCAGGCGATCCACGCGCGCCACGGTGTGGAGGTTCTGGCCGCGACGCCCGCGCCAACCGTGTTGGAGGGCGACT ACACCAAATCCTTCACGGTGCTGCTGAAGTTCGCCTCTGCCGAGGTCCATGCCGAATGGTGGGCGGATCCCGACTATCAG CCGCTGCGCAAACGCCGCCACGAGCTGACCAACACAGACACGTCGCTGGCGATGGTCGTTCCGACCTTCACACCTTGA
Upstream 100 bases:
>100_bases CGGGGCTGGCATCCACTTCATCCAGGAAGATCAACCCGAAGCCATCGGTCGCAACCTGTCCGACTGGCTGCGCGACCGCG TCACGAGAGGAAACTGAACC
Downstream 100 bases:
>100_bases TATCCGCCTTGGAGCAAACCCAATGAACAAAACCGTTCAATTCGAAACCCTCGGAGGGCCAGAGGTTCTGACTTTCGTGG ATGCCCCTGCCCCGTCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSDTNPVYMIVMLEIDDMPTFFEDYANPLQAIHARHGVEVLAATPAPTVLEGDYTKSFTVLLKFASAEVHAEWWADPDYQ PLRKRRHELTNTDTSLAMVVPTFTP
Sequences:
>Translated_105_residues MSDTNPVYMIVMLEIDDMPTFFEDYANPLQAIHARHGVEVLAATPAPTVLEGDYTKSFTVLLKFASAEVHAEWWADPDYQ PLRKRRHELTNTDTSLAMVVPTFTP >Mature_104_residues SDTNPVYMIVMLEIDDMPTFFEDYANPLQAIHARHGVEVLAATPAPTVLEGDYTKSFTVLLKFASAEVHAEWWADPDYQP LRKRRHELTNTDTSLAMVVPTFTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11897; Mature: 11765
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTNPVYMIVMLEIDDMPTFFEDYANPLQAIHARHGVEVLAATPAPTVLEGDYTKSFTV CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCEEE LLKFASAEVHAEWWADPDYQPLRKRRHELTNTDTSLAMVVPTFTP EEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC >Mature Secondary Structure SDTNPVYMIVMLEIDDMPTFFEDYANPLQAIHARHGVEVLAATPAPTVLEGDYTKSFTV CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCEEE LLKFASAEVHAEWWADPDYQPLRKRRHELTNTDTSLAMVVPTFTP EEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA