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The map label for this gene is ycfQ [C]

Identifier: 89055110

GI number: 89055110

Start: 2638607

End: 2639191

Strand: Direct

Name: ycfQ [C]

Synonym: Jann_2619

Alternate gene names: 89055110

Gene position: 2638607-2639191 (Clockwise)

Preceding gene: 89055109

Following gene: 89055111

Centisome position: 61.11

GC content: 59.15

Gene sequence:

>585_bases
ATGGCACGTCAAATCGCATATGATCCAAATACTCTGCGTGAAAACCTTCTGTCGGTTTTCTGGCAGCAGGGCTATGCGGA
AACGTCGCTGAGTGATCTTGAGGCAGCGACCGGGCTGAACCGCCGCCAGCTCTACAATGGCCCGGGCGACAAGTTGGCGA
TGTTCGTTCAGGCCATGGATGATTTCGCGGAGCGTGCCGGTCGGGAGTTTCTCGGGCCGTTGGAACAGGACGGAGCCGGG
ATTGCCGACATCGTCCATCTTCTCTCAACCTTCGTGGCGTTGGCCGCTGCAAAGGACGGTCCGACCGGATGCCTTGTCTG
TAGCGTGTCACAAGAGGAGGTCTCGCAGGAACAGGCCGTGAAACGGCGTGCCGACGCTTATTTCGAGCGTATCAAAGCCG
CTTACGAAAATGCGCTGCGCCGGTCAGTCGCGCGCGGCGAATGTGATCTGACGGAACGTGCGATCAGCGACCATGCCTCT
GGGTTGTATGCCGCCCATGTCGCCCTTTGCATCCTTGGCCGGGCCGGGCGTCCGAACAAGGAACTAAACGCGATCGCAGA
AAACGCGCTGAAGGACCTGGTCTAA

Upstream 100 bases:

>100_bases
TGAAGACCGTCAGCTTAATTGCACACCATTATCCGACCCAAAGTCCCACCTTAAATCGATCACTGCTTGACATTATTCAC
CGATCAGTGAATATGAATCC

Downstream 100 bases:

>100_bases
AATTTCACCATAATTCACCAATCGTTGAAATAAGGAGAACACAATGAAACGAATACGAGCGCTGGCGACAGCCGCAACAC
TGGCTGCGGGCCTCGCCATG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; TetR-Family Protein Transcriptional Regulator; TetR Family Regulatory Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MARQIAYDPNTLRENLLSVFWQQGYAETSLSDLEAATGLNRRQLYNGPGDKLAMFVQAMDDFAERAGREFLGPLEQDGAG
IADIVHLLSTFVALAAAKDGPTGCLVCSVSQEEVSQEQAVKRRADAYFERIKAAYENALRRSVARGECDLTERAISDHAS
GLYAAHVALCILGRAGRPNKELNAIAENALKDLV

Sequences:

>Translated_194_residues
MARQIAYDPNTLRENLLSVFWQQGYAETSLSDLEAATGLNRRQLYNGPGDKLAMFVQAMDDFAERAGREFLGPLEQDGAG
IADIVHLLSTFVALAAAKDGPTGCLVCSVSQEEVSQEQAVKRRADAYFERIKAAYENALRRSVARGECDLTERAISDHAS
GLYAAHVALCILGRAGRPNKELNAIAENALKDLV
>Mature_193_residues
ARQIAYDPNTLRENLLSVFWQQGYAETSLSDLEAATGLNRRQLYNGPGDKLAMFVQAMDDFAERAGREFLGPLEQDGAGI
ADIVHLLSTFVALAAAKDGPTGCLVCSVSQEEVSQEQAVKRRADAYFERIKAAYENALRRSVARGECDLTERAISDHASG
LYAAHVALCILGRAGRPNKELNAIAENALKDLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21117; Mature: 20986

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQIAYDPNTLRENLLSVFWQQGYAETSLSDLEAATGLNRRQLYNGPGDKLAMFVQAMD
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
DFAERAGREFLGPLEQDGAGIADIVHLLSTFVALAAAKDGPTGCLVCSVSQEEVSQEQAV
HHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
KRRADAYFERIKAAYENALRRSVARGECDLTERAISDHASGLYAAHVALCILGRAGRPNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ELNAIAENALKDLV
HHHHHHHHHHHHCC
>Mature Secondary Structure 
ARQIAYDPNTLRENLLSVFWQQGYAETSLSDLEAATGLNRRQLYNGPGDKLAMFVQAMD
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
DFAERAGREFLGPLEQDGAGIADIVHLLSTFVALAAAKDGPTGCLVCSVSQEEVSQEQAV
HHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
KRRADAYFERIKAAYENALRRSVARGECDLTERAISDHASGLYAAHVALCILGRAGRPNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ELNAIAENALKDLV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA