| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is eutC [H]
Identifier: 89055067
GI number: 89055067
Start: 2586108
End: 2586878
Strand: Reverse
Name: eutC [H]
Synonym: Jann_2576
Alternate gene names: 89055067
Gene position: 2586878-2586108 (Counterclockwise)
Preceding gene: 89055068
Following gene: 89055066
Centisome position: 59.91
GC content: 66.54
Gene sequence:
>771_bases ATGAGTGACCATCTGCCCGGGCACCTATCCGCCATCACGCAAGCGCGCCTGACCCTCGGGCCGCGCCGCCGCACGCAGGA CACGCGCACGGCGCTAGCCTTTGCGCTCGATCATGCACGTGCCAGAGAAGCCGTGCTGTCGGAGTTGGACGTGGACGGCC TGGCGACCACCCTCGCGGTGGCGGATCTGTCCCACGATGTCGTAACCAGCGCGGCAGGGTCCCGTGACACCTATATTCGC CGTCCTGATCTGGGGCGTCGGCTGTCGCCTGAGGATCGTGCCCGATTGACGCCGCAAGAGCCGTGCGATGTCGCTCTGGT TCTCGGCGATGGCCTGTCGGCTATTGCCGTGGCCCTGAACGGGGCGGCGTTCATGGTGGCGCTGGCGAACAAGCTCGGCG CATGCGGTCTTGGTACAAGTGACGTCATTCTCGCCCGTCAGGCCCGCGTGGCCTTGGGCGATGACATTGCGCAGGCGTTG GGTGCACAGACCGTCGTGATGGCTTTGGGAGAACGGCCCGGCCTGTCCGCCGCCGACAGCCTTGGGGTCTACATCACCAA AAACCCGACCGCCACTACACCCGACAGCGCCCGCAATTGCCTGTCCAACATCCGCGAGGCCGGTCTGCCCGTGGCGGATG CGGCGCATCAGGCGACAACCCTGATCAAGGCCATGCGGGCTTTCGGGGGCAGTGGTGTCGCGCTGAACACGGCCCTGCAA AAGAACAGGCGGTTGGACGGGGATGACAGCGCGTCGCCGCACCGCCTCTGA
Upstream 100 bases:
>100_bases CAGAATTTGCCGCCTGGATGGAGGCCAACGGCATCGGCTCTGCGGATGTGCGGTTGCCGCCGTTGGAGACGGCTCTGGCG CAATTGAGGCTGCCGGGATC
Downstream 100 bases:
>100_bases TGACTTGCAAGTAAGACGAATTGTCATGATATTGTTTCGGATGTCCACGGCTTTCCAGCGGTTGCAATATTGCCATTAAG GAAATTTGCAAGGGTTTCCG
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSDHLPGHLSAITQARLTLGPRRRTQDTRTALAFALDHARAREAVLSELDVDGLATTLAVADLSHDVVTSAAGSRDTYIR RPDLGRRLSPEDRARLTPQEPCDVALVLGDGLSAIAVALNGAAFMVALANKLGACGLGTSDVILARQARVALGDDIAQAL GAQTVVMALGERPGLSAADSLGVYITKNPTATTPDSARNCLSNIREAGLPVADAAHQATTLIKAMRAFGGSGVALNTALQ KNRRLDGDDSASPHRL
Sequences:
>Translated_256_residues MSDHLPGHLSAITQARLTLGPRRRTQDTRTALAFALDHARAREAVLSELDVDGLATTLAVADLSHDVVTSAAGSRDTYIR RPDLGRRLSPEDRARLTPQEPCDVALVLGDGLSAIAVALNGAAFMVALANKLGACGLGTSDVILARQARVALGDDIAQAL GAQTVVMALGERPGLSAADSLGVYITKNPTATTPDSARNCLSNIREAGLPVADAAHQATTLIKAMRAFGGSGVALNTALQ KNRRLDGDDSASPHRL >Mature_255_residues SDHLPGHLSAITQARLTLGPRRRTQDTRTALAFALDHARAREAVLSELDVDGLATTLAVADLSHDVVTSAAGSRDTYIRR PDLGRRLSPEDRARLTPQEPCDVALVLGDGLSAIAVALNGAAFMVALANKLGACGLGTSDVILARQARVALGDDIAQALG AQTVVMALGERPGLSAADSLGVYITKNPTATTPDSARNCLSNIREAGLPVADAAHQATTLIKAMRAFGGSGVALNTALQK NRRLDGDDSASPHRL
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=222, Percent_Identity=34.6846846846847, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 26610; Mature: 26479
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHLPGHLSAITQARLTLGPRRRTQDTRTALAFALDHARAREAVLSELDVDGLATTLAV CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ADLSHDVVTSAAGSRDTYIRRPDLGRRLSPEDRARLTPQEPCDVALVLGDGLSAIAVALN HHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECCCHHHHHHHHC GAAFMVALANKLGACGLGTSDVILARQARVALGDDIAQALGAQTVVMALGERPGLSAADS CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC LGVYITKNPTATTPDSARNCLSNIREAGLPVADAAHQATTLIKAMRAFGGSGVALNTALQ CCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH KNRRLDGDDSASPHRL HCCCCCCCCCCCCCCC >Mature Secondary Structure SDHLPGHLSAITQARLTLGPRRRTQDTRTALAFALDHARAREAVLSELDVDGLATTLAV CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ADLSHDVVTSAAGSRDTYIRRPDLGRRLSPEDRARLTPQEPCDVALVLGDGLSAIAVALN HHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECCCHHHHHHHHC GAAFMVALANKLGACGLGTSDVILARQARVALGDDIAQALGAQTVVMALGERPGLSAADS CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC LGVYITKNPTATTPDSARNCLSNIREAGLPVADAAHQATTLIKAMRAFGGSGVALNTALQ CCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH KNRRLDGDDSASPHRL HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA