Click here to switch to the map view.

The map label for this gene is 89055063

Identifier: 89055063

GI number: 89055063

Start: 2579430

End: 2582042

Strand: Reverse

Name: 89055063

Synonym: Jann_2572

Alternate gene names: NA

Gene position: 2582042-2579430 (Counterclockwise)

Preceding gene: 89055064

Following gene: 89055062

Centisome position: 59.8

GC content: 66.17

Gene sequence:

>2613_bases
ATGCGGCTGCGCGCGCTCCACCTGGGCAATGTGCGCAAGTTCGCCGGCCAGCGCGCGTCTATCACCGGGATCGGCGACGG
CATAACCGTGGTGTCGGAGGCCAATGAATTCGGCAAATCCACCTTCTTCGACGCGCTCCACGCGCTGTTCTTTGAGAAGT
ACAGCTCTGCCGCCAAGCCGGTGAAAAACCTGCAACCCTATGCCAGGGGCGCGGTTGAGGTCGCGGCGGAGATCGAGACG
GATGCAGGTCATTTCCGCGTGGAAAAGACGTTCCTGAAGGGCTCGGGATCCGCGCGGGTCCTGCGATTGCCGGGGGAGGC
GGTCGTGGCCCAGGATGATGAGGCGGAGCGTTGGCTTCTGGACTTGCTTGGGTCCGACAAGAATGGCCCGGCGGGCTTGT
TGTGGGTGCGCCAGGGCGTCACTGATCTTGCCGTCGACAGCAAGGTGGACGGTGCCAGGCAATTGGACGAGCGCCGCGAT
TTGCTGTCGTCCGTGAGCGGAGAGATTGATGCCATGACCGGCGGTCGGCGCATGGACCGGGTGATGAAGCGCGTGGCAGA
GGAGTTGAAAGGCCTGGTCACGGCCACCGGAAAACCCACCGGCGCGTGGCGCACGCTCAACACCGACATCGCCGGGATGA
AGGAGGATCTGGCCGCGCTGACCGCACAGATCGATAGGCTCTCTGGTGCACTTGCGGCGCGCAGGCAGGTGGAGGCGCAG
TTGGCGCATCTGGATCAAGAGGAGGCCAGGGCCATCCGGGGGGCGGCTTTGGCCAAGGCAGAGGTGGACTTTGCCAACGC
CAAAGCCCATGCGGGTCAAGTGGATCGTGCCGCCCAAACCCACCGTCTGGCCGAGATCGAGGCGCAGGCCGCGCGCGACA
AGCTGGACGTGTTTCTTGCGGCGGTGGAAAGGTTAACCACCGCACAGGCGGCGGTGACGCAAGCGCAGGATGTGTTGCGC
GACGCCATGCGTGAGACGGGTCAACGGGACAGTATGTTGACGCAGATGCGGGCCACGAGGTCGGAGGCGCAACAGGCTGT
TTCTCAGGCACGCGCGGATCAGGAGGCGGCGCGCAAACAGGCCGAGGCGCGGGCCGCACGGGTGCGAGCGGACGACTTGA
AGAACTGGCTGCAACAAATTGAAGATGCTCAAAAAACCCGCGATGCAGCCCATGCAAAAGTGGCGGCATCCTCGGCCACG
CCCGAATGGCTTCGCCGCGTGGAAGAGGCGCAAAGTGACGTCGCCGCACAGACCGCGACCCTTGCGGCGCACGCGGCGAC
CTTGCGAATGACCTACGATGGAGAGGCGCGTGCCCTGCGCGACGGATCACCCCTGCCGGGCGGACAGGACCTCGCCCTAC
ATGGTGCGGTAGAGTTAACGCTGCCCGGCATTGGCACGCTGTCATTGCAGGTGCCGGAGGTCTCCGACACCGACCTGACC
CGCGCGATGTCGACACGCGATGATCTGTTGGCCACAGCGGCCGCAAGCGATATCCAAGATGCCCGCGATCTGACGGCGCA
GCGTGCGGTGGCGGAGCAGGAGCGGGACACGGCCGATGCAATCCTGACGACGCTGGCCCCCGGCGGACCTGACGGCTTGC
GCGCGCAGATGGCCGCTGCCGAGCTGGCCGCTGGTGAGGTCAATGACACCCCGCTGCCCGAGCCGGAGGCTCTGACCAAG
ACGCTGGATCGCGCGCAGGCGGCAGACATTGAGGCGCAAGCCACCCTCACTGTCGCGGAGACGGCGGCAACACAGGCACG
CGAAGCTGCAATCCGCGCCCAAGCGGCGGCGGATGCGGCACAGCAGGCGTTGGACATGGCGCGCGCTGCCGCAGGCGCGG
AAGACACGCGGGAGGCCGTCAAAACGGAGTTGATCCGCGCAAACGCCGTCGCCGCCGACGCGCTGAAAACCACCGCGACG
GCCCTCGCAACGCTCCGTGAAAAAGCGCCTGACATGGTGACGGCGGAAGCTGAAGTGACCCGGGCCCGCACCGCAATCCG
CGCCGCCGATGAGCAAACCCAGAAGGCCCGCATCCGTGTCGCGGAGTTGTCCGCCGAGATCCGCGCCCTGTCCGAGGCCG
GGATCGAGGAGACCCGCGACACCCTTGCCGGAGAACTCGATACCGCCCGCGCCCGGGCCGCCCGTTTTGCCGCCAAAGCC
GCCGCGTTACAGCGCCTGCAGGCCGCGCTGGACGCCGAACGGACAGCGGCGCGAGACACCTATTTTGGTCCGGTGCAGGC
AGAGCTGAAACCGCTCCTGTCGATCCTCTATGACGATGCGGGTTTGCAGTTTGACAGCGACAGTCTGCTGCCCGCAGGCC
TCACACGGGCCGAGACGGAGGAGACGTTGGACCGCTTGTCCGGCGGCACGCAGGAGCAGATCGCGATCCTGACGCGGCTG
GCCTTCGCGCGGTTGTTCAAGCGGCAGGGACGACACATGCCCATCGTTCTGGACGACGCGCTGGTCTATTCCGACGACGG
GCGCATCGTGAGGATGTTCACCGCGTTGACCCGGGTGGCGCAGGATCAGCAAATCCTGGTGTTCACCTGCCGCACGATGG
CGTTTCTGAGCCTTGGCGGCACACGGCCGGAGGTCACAATCCGTGACCTTTGA

Upstream 100 bases:

>100_bases
CTGGTGCGGGAAGCGGATGATCAGGCACTGAGCCCGGAGGCACGCGCCACGGCAGACGCTGCGCTGTCGCTCTTGTTCAC
CTACGCGGCGGAGGCCTGAG

Downstream 100 bases:

>100_bases
ACAAATCCGCACCTTTCTCTGGGTCGCGCGCTTGGGCGGCTTTCGCAAAGCCTCCGATCGCTTGAATCTGTCACAACCCG
CCGTGTCGACGCGGATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain Protein; RecF/RecN/SMC N Terminal Domain-Containing Protein; RecF/RecN/SMC N Terminal Domain; ATPase Involved In DNA Repair-Like Protein; DNA Double-Strand Break Repair

Number of amino acids: Translated: 870; Mature: 870

Protein sequence:

>870_residues
MRLRALHLGNVRKFAGQRASITGIGDGITVVSEANEFGKSTFFDALHALFFEKYSSAAKPVKNLQPYARGAVEVAAEIET
DAGHFRVEKTFLKGSGSARVLRLPGEAVVAQDDEAERWLLDLLGSDKNGPAGLLWVRQGVTDLAVDSKVDGARQLDERRD
LLSSVSGEIDAMTGGRRMDRVMKRVAEELKGLVTATGKPTGAWRTLNTDIAGMKEDLAALTAQIDRLSGALAARRQVEAQ
LAHLDQEEARAIRGAALAKAEVDFANAKAHAGQVDRAAQTHRLAEIEAQAARDKLDVFLAAVERLTTAQAAVTQAQDVLR
DAMRETGQRDSMLTQMRATRSEAQQAVSQARADQEAARKQAEARAARVRADDLKNWLQQIEDAQKTRDAAHAKVAASSAT
PEWLRRVEEAQSDVAAQTATLAAHAATLRMTYDGEARALRDGSPLPGGQDLALHGAVELTLPGIGTLSLQVPEVSDTDLT
RAMSTRDDLLATAAASDIQDARDLTAQRAVAEQERDTADAILTTLAPGGPDGLRAQMAAAELAAGEVNDTPLPEPEALTK
TLDRAQAADIEAQATLTVAETAATQAREAAIRAQAAADAAQQALDMARAAAGAEDTREAVKTELIRANAVAADALKTTAT
ALATLREKAPDMVTAEAEVTRARTAIRAADEQTQKARIRVAELSAEIRALSEAGIEETRDTLAGELDTARARAARFAAKA
AALQRLQAALDAERTAARDTYFGPVQAELKPLLSILYDDAGLQFDSDSLLPAGLTRAETEETLDRLSGGTQEQIAILTRL
AFARLFKRQGRHMPIVLDDALVYSDDGRIVRMFTALTRVAQDQQILVFTCRTMAFLSLGGTRPEVTIRDL

Sequences:

>Translated_870_residues
MRLRALHLGNVRKFAGQRASITGIGDGITVVSEANEFGKSTFFDALHALFFEKYSSAAKPVKNLQPYARGAVEVAAEIET
DAGHFRVEKTFLKGSGSARVLRLPGEAVVAQDDEAERWLLDLLGSDKNGPAGLLWVRQGVTDLAVDSKVDGARQLDERRD
LLSSVSGEIDAMTGGRRMDRVMKRVAEELKGLVTATGKPTGAWRTLNTDIAGMKEDLAALTAQIDRLSGALAARRQVEAQ
LAHLDQEEARAIRGAALAKAEVDFANAKAHAGQVDRAAQTHRLAEIEAQAARDKLDVFLAAVERLTTAQAAVTQAQDVLR
DAMRETGQRDSMLTQMRATRSEAQQAVSQARADQEAARKQAEARAARVRADDLKNWLQQIEDAQKTRDAAHAKVAASSAT
PEWLRRVEEAQSDVAAQTATLAAHAATLRMTYDGEARALRDGSPLPGGQDLALHGAVELTLPGIGTLSLQVPEVSDTDLT
RAMSTRDDLLATAAASDIQDARDLTAQRAVAEQERDTADAILTTLAPGGPDGLRAQMAAAELAAGEVNDTPLPEPEALTK
TLDRAQAADIEAQATLTVAETAATQAREAAIRAQAAADAAQQALDMARAAAGAEDTREAVKTELIRANAVAADALKTTAT
ALATLREKAPDMVTAEAEVTRARTAIRAADEQTQKARIRVAELSAEIRALSEAGIEETRDTLAGELDTARARAARFAAKA
AALQRLQAALDAERTAARDTYFGPVQAELKPLLSILYDDAGLQFDSDSLLPAGLTRAETEETLDRLSGGTQEQIAILTRL
AFARLFKRQGRHMPIVLDDALVYSDDGRIVRMFTALTRVAQDQQILVFTCRTMAFLSLGGTRPEVTIRDL
>Mature_870_residues
MRLRALHLGNVRKFAGQRASITGIGDGITVVSEANEFGKSTFFDALHALFFEKYSSAAKPVKNLQPYARGAVEVAAEIET
DAGHFRVEKTFLKGSGSARVLRLPGEAVVAQDDEAERWLLDLLGSDKNGPAGLLWVRQGVTDLAVDSKVDGARQLDERRD
LLSSVSGEIDAMTGGRRMDRVMKRVAEELKGLVTATGKPTGAWRTLNTDIAGMKEDLAALTAQIDRLSGALAARRQVEAQ
LAHLDQEEARAIRGAALAKAEVDFANAKAHAGQVDRAAQTHRLAEIEAQAARDKLDVFLAAVERLTTAQAAVTQAQDVLR
DAMRETGQRDSMLTQMRATRSEAQQAVSQARADQEAARKQAEARAARVRADDLKNWLQQIEDAQKTRDAAHAKVAASSAT
PEWLRRVEEAQSDVAAQTATLAAHAATLRMTYDGEARALRDGSPLPGGQDLALHGAVELTLPGIGTLSLQVPEVSDTDLT
RAMSTRDDLLATAAASDIQDARDLTAQRAVAEQERDTADAILTTLAPGGPDGLRAQMAAAELAAGEVNDTPLPEPEALTK
TLDRAQAADIEAQATLTVAETAATQAREAAIRAQAAADAAQQALDMARAAAGAEDTREAVKTELIRANAVAADALKTTAT
ALATLREKAPDMVTAEAEVTRARTAIRAADEQTQKARIRVAELSAEIRALSEAGIEETRDTLAGELDTARARAARFAAKA
AALQRLQAALDAERTAARDTYFGPVQAELKPLLSILYDDAGLQFDSDSLLPAGLTRAETEETLDRLSGGTQEQIAILTRL
AFARLFKRQGRHMPIVLDDALVYSDDGRIVRMFTALTRVAQDQQILVFTCRTMAFLSLGGTRPEVTIRDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93174; Mature: 93174

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRALHLGNVRKFAGQRASITGIGDGITVVSEANEFGKSTFFDALHALFFEKYSSAAKP
CCEEEEECCCHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKNLQPYARGAVEVAAEIETDAGHFRVEKTFLKGSGSARVLRLPGEAVVAQDDEAERWLL
HHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCEEEEECCCCEEEECCCHHHHHHH
DLLGSDKNGPAGLLWVRQGVTDLAVDSKVDGARQLDERRDLLSSVSGEIDAMTGGRRMDR
HHHCCCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VMKRVAEELKGLVTATGKPTGAWRTLNTDIAGMKEDLAALTAQIDRLSGALAARRQVEAQ
HHHHHHHHHHHHEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHLDQEEARAIRGAALAKAEVDFANAKAHAGQVDRAAQTHRLAEIEAQAARDKLDVFLA
HHHCCHHHHHHHHHHHHHHHHCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVERLTTAQAAVTQAQDVLRDAMRETGQRDSMLTQMRATRSEAQQAVSQARADQEAARKQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEARAARVRADDLKNWLQQIEDAQKTRDAAHAKVAASSATPEWLRRVEEAQSDVAAQTAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LAAHAATLRMTYDGEARALRDGSPLPGGQDLALHGAVELTLPGIGTLSLQVPEVSDTDLT
HHHHHEEEEEEECCCCCEECCCCCCCCCCCEEEECEEEEEECCCCEEEEECCCCCCHHHH
RAMSTRDDLLATAAASDIQDARDLTAQRAVAEQERDTADAILTTLAPGGPDGLRAQMAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ELAAGEVNDTPLPEPEALTKTLDRAQAADIEAQATLTVAETAATQAREAAIRAQAAADAA
HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
QQALDMARAAAGAEDTREAVKTELIRANAVAADALKTTATALATLREKAPDMVTAEAEVT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHH
RARTAIRAADEQTQKARIRVAELSAEIRALSEAGIEETRDTLAGELDTARARAARFAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH
AALQRLQAALDAERTAARDTYFGPVQAELKPLLSILYDDAGLQFDSDSLLPAGLTRAETE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHH
ETLDRLSGGTQEQIAILTRLAFARLFKRQGRHMPIVLDDALVYSDDGRIVRMFTALTRVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHHHHHHC
QDQQILVFTCRTMAFLSLGGTRPEVTIRDL
CCCEEEEEHHHHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MRLRALHLGNVRKFAGQRASITGIGDGITVVSEANEFGKSTFFDALHALFFEKYSSAAKP
CCEEEEECCCHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKNLQPYARGAVEVAAEIETDAGHFRVEKTFLKGSGSARVLRLPGEAVVAQDDEAERWLL
HHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCEEEEECCCCEEEECCCHHHHHHH
DLLGSDKNGPAGLLWVRQGVTDLAVDSKVDGARQLDERRDLLSSVSGEIDAMTGGRRMDR
HHHCCCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VMKRVAEELKGLVTATGKPTGAWRTLNTDIAGMKEDLAALTAQIDRLSGALAARRQVEAQ
HHHHHHHHHHHHEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHLDQEEARAIRGAALAKAEVDFANAKAHAGQVDRAAQTHRLAEIEAQAARDKLDVFLA
HHHCCHHHHHHHHHHHHHHHHCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVERLTTAQAAVTQAQDVLRDAMRETGQRDSMLTQMRATRSEAQQAVSQARADQEAARKQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEARAARVRADDLKNWLQQIEDAQKTRDAAHAKVAASSATPEWLRRVEEAQSDVAAQTAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LAAHAATLRMTYDGEARALRDGSPLPGGQDLALHGAVELTLPGIGTLSLQVPEVSDTDLT
HHHHHEEEEEEECCCCCEECCCCCCCCCCCEEEECEEEEEECCCCEEEEECCCCCCHHHH
RAMSTRDDLLATAAASDIQDARDLTAQRAVAEQERDTADAILTTLAPGGPDGLRAQMAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ELAAGEVNDTPLPEPEALTKTLDRAQAADIEAQATLTVAETAATQAREAAIRAQAAADAA
HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
QQALDMARAAAGAEDTREAVKTELIRANAVAADALKTTATALATLREKAPDMVTAEAEVT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHH
RARTAIRAADEQTQKARIRVAELSAEIRALSEAGIEETRDTLAGELDTARARAARFAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH
AALQRLQAALDAERTAARDTYFGPVQAELKPLLSILYDDAGLQFDSDSLLPAGLTRAETE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHH
ETLDRLSGGTQEQIAILTRLAFARLFKRQGRHMPIVLDDALVYSDDGRIVRMFTALTRVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHHHHHHC
QDQQILVFTCRTMAFLSLGGTRPEVTIRDL
CCCEEEEEHHHHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA