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The map label for this gene is yiaN [C]

Identifier: 89055058

GI number: 89055058

Start: 2574727

End: 2576010

Strand: Reverse

Name: yiaN [C]

Synonym: Jann_2567

Alternate gene names: 89055058

Gene position: 2576010-2574727 (Counterclockwise)

Preceding gene: 89055059

Following gene: 89055057

Centisome position: 59.66

GC content: 63.86

Gene sequence:

>1284_bases
ATGGTCACCTATATCTCTGTCGGCCTCCTTGGCCTGCTGGCCCTGTCGATCCCGGTTGGTATCGTCCTGTTTTTGCTGGG
GTTTGGCGTCGACCAGTTCTTCTCCAACTTCCCGCTGTCACGCGCTCTGGGCAACATGGTCTGGACCGCATCGAACTCCG
CCACGCTGATCGCGATCCCGTTCTTCGTGTTGCTCGGCGAGGTCCTCGTCCGCTCCGGCGTGGCGACCAAAACCTATGCA
GCACTTGACCGCTGGGTCAGCTGGCTGCCGGGCGGGTTGGTCCACGCCAACGTCGCCACGGCGACGATGTTTTCGGCCAC
CTCCGGGTCCTCCGTTGCGACTGCTGCGACCGTGGCCACCGTCGCCATGCCGCAGGCCGAAAAGCTCGGCTATGACCCGA
AACTCTTCTCCGGCGCCATCGCGGCGGGCGGCACGTTGGGCATCATGATCCCGCCATCGATCAACCTGATCGTCTTCGGG
TTCCTCACCCAATCCTCGATCCCGCAATTGTTCCTCGCGGGCCTGATCCCCGGCATCCTGCTGGCGTGCGCCTTCATGGC
CGTGGCCGCCATCATCTGCCTGATCCGGCCCGAATTGGGCGGCACCCGCCGCACGTTTCCGTTCCCGCAAATGTTGCGCG
CGCTGGTGGATCTGCTGCCGATCCTGATCCTGTTCGGGCTGATCGTCGGGTCCATATACGCCGGATGGGCCACCCCGACG
GAGGCCGCCGCCGTGGGGGTCGCAGGCGCGCTGGTCATCGCCACGGCGGCGGGTGGCATGTCCCTGCCAATGATGCGCGA
CGCGCTTTTGGGCACGATCAAGATCACCTGCATGATCATGCTGATCATCATCGGCGCGTCGTTCCTGAACTTCACGCTGG
CCTCTGCCGGATTGGGCCGCGAATTGACCGACTTCATGGAAGGTCTGGGCCTTGGGCCGTTCGGCTTCATCATGGCGGTC
GTGGTGCTTTACATCGTGCTGGGGTTCTTCATTGAAACCCTGTCGCTGATGGTGGTGACGATCCCGATCATCGTGCCGAT
GGTGCTGGCGCAGGGCTATGACGCGATCTGGTTCGGCATCCTGATGATCGTGCTGATCGAGATGGCGCTGATCACGCCGC
CGGTCGGGCTGAACCTCTATGTGGTGCAGGGGGCGCGGAAATCGGGGTCGCTCAACGAGGTGATGCTGGGGGCGATCCCC
TTTGCGCTGGTGATGCTGGCCATGGCGTTCGCGCTGATCGCCTTCCCCGGGCTGGCGCTGTGGTTGCCGGGCGTCCTGCA
ATAG

Upstream 100 bases:

>100_bases
CGTGCCTGGTCACGCTCTGCGCGCTCAGCCTTATCGTCAAAGGCAGATTCGCCGAAACCGAGCCCTTCGTGGGCGCCTTC
GCAGAACAGGACAGCCTCTG

Downstream 100 bases:

>100_bases
ACTGATTTCAAGACTTTAATGACGGGTTGCGGGGCTTGCGGGCCGCCCGCGAATGGAGGAGATGCGACATGTGGCAATTC
TGGGTCGACCGTGGGGGCAC

Product: TRAP C4-dicarboxylate transport system permease DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MVTYISVGLLGLLALSIPVGIVLFLLGFGVDQFFSNFPLSRALGNMVWTASNSATLIAIPFFVLLGEVLVRSGVATKTYA
ALDRWVSWLPGGLVHANVATATMFSATSGSSVATAATVATVAMPQAEKLGYDPKLFSGAIAAGGTLGIMIPPSINLIVFG
FLTQSSIPQLFLAGLIPGILLACAFMAVAAIICLIRPELGGTRRTFPFPQMLRALVDLLPILILFGLIVGSIYAGWATPT
EAAAVGVAGALVIATAAGGMSLPMMRDALLGTIKITCMIMLIIIGASFLNFTLASAGLGRELTDFMEGLGLGPFGFIMAV
VVLYIVLGFFIETLSLMVVTIPIIVPMVLAQGYDAIWFGILMIVLIEMALITPPVGLNLYVVQGARKSGSLNEVMLGAIP
FALVMLAMAFALIAFPGLALWLPGVLQ

Sequences:

>Translated_427_residues
MVTYISVGLLGLLALSIPVGIVLFLLGFGVDQFFSNFPLSRALGNMVWTASNSATLIAIPFFVLLGEVLVRSGVATKTYA
ALDRWVSWLPGGLVHANVATATMFSATSGSSVATAATVATVAMPQAEKLGYDPKLFSGAIAAGGTLGIMIPPSINLIVFG
FLTQSSIPQLFLAGLIPGILLACAFMAVAAIICLIRPELGGTRRTFPFPQMLRALVDLLPILILFGLIVGSIYAGWATPT
EAAAVGVAGALVIATAAGGMSLPMMRDALLGTIKITCMIMLIIIGASFLNFTLASAGLGRELTDFMEGLGLGPFGFIMAV
VVLYIVLGFFIETLSLMVVTIPIIVPMVLAQGYDAIWFGILMIVLIEMALITPPVGLNLYVVQGARKSGSLNEVMLGAIP
FALVMLAMAFALIAFPGLALWLPGVLQ
>Mature_427_residues
MVTYISVGLLGLLALSIPVGIVLFLLGFGVDQFFSNFPLSRALGNMVWTASNSATLIAIPFFVLLGEVLVRSGVATKTYA
ALDRWVSWLPGGLVHANVATATMFSATSGSSVATAATVATVAMPQAEKLGYDPKLFSGAIAAGGTLGIMIPPSINLIVFG
FLTQSSIPQLFLAGLIPGILLACAFMAVAAIICLIRPELGGTRRTFPFPQMLRALVDLLPILILFGLIVGSIYAGWATPT
EAAAVGVAGALVIATAAGGMSLPMMRDALLGTIKITCMIMLIIIGASFLNFTLASAGLGRELTDFMEGLGLGPFGFIMAV
VVLYIVLGFFIETLSLMVVTIPIIVPMVLAQGYDAIWFGILMIVLIEMALITPPVGLNLYVVQGARKSGSLNEVMLGAIP
FALVMLAMAFALIAFPGLALWLPGVLQ

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=401, Percent_Identity=29.6758104738155, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44591; Mature: 44591

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTYISVGLLGLLALSIPVGIVLFLLGFGVDQFFSNFPLSRALGNMVWTASNSATLIAIP
CCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHCCEEEECCCCCEEHHHH
FFVLLGEVLVRSGVATKTYAALDRWVSWLPGGLVHANVATATMFSATSGSSVATAATVAT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHEECCCCCCHHHHHHHHH
VAMPQAEKLGYDPKLFSGAIAAGGTLGIMIPPSINLIVFGFLTQSSIPQLFLAGLIPGIL
HHCCCHHHCCCCCHHHHCHHHCCCEEEEEECCCCCEEEEEHHHHCCHHHHHHHHHHHHHH
LACAFMAVAAIICLIRPELGGTRRTFPFPQMLRALVDLLPILILFGLIVGSIYAGWATPT
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EAAAVGVAGALVIATAAGGMSLPMMRDALLGTIKITCMIMLIIIGASFLNFTLASAGLGR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ELTDFMEGLGLGPFGFIMAVVVLYIVLGFFIETLSLMVVTIPIIVPMVLAQGYDAIWFGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMIVLIEMALITPPVGLNLYVVQGARKSGSLNEVMLGAIPFALVMLAMAFALIAFPGLAL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
WLPGVLQ
HCCCCCC
>Mature Secondary Structure
MVTYISVGLLGLLALSIPVGIVLFLLGFGVDQFFSNFPLSRALGNMVWTASNSATLIAIP
CCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHCCEEEECCCCCEEHHHH
FFVLLGEVLVRSGVATKTYAALDRWVSWLPGGLVHANVATATMFSATSGSSVATAATVAT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHEECCCCCCHHHHHHHHH
VAMPQAEKLGYDPKLFSGAIAAGGTLGIMIPPSINLIVFGFLTQSSIPQLFLAGLIPGIL
HHCCCHHHCCCCCHHHHCHHHCCCEEEEEECCCCCEEEEEHHHHCCHHHHHHHHHHHHHH
LACAFMAVAAIICLIRPELGGTRRTFPFPQMLRALVDLLPILILFGLIVGSIYAGWATPT
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EAAAVGVAGALVIATAAGGMSLPMMRDALLGTIKITCMIMLIIIGASFLNFTLASAGLGR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ELTDFMEGLGLGPFGFIMAVVVLYIVLGFFIETLSLMVVTIPIIVPMVLAQGYDAIWFGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMIVLIEMALITPPVGLNLYVVQGARKSGSLNEVMLGAIPFALVMLAMAFALIAFPGLAL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
WLPGVLQ
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]