| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054972
Identifier: 89054972
GI number: 89054972
Start: 2477011
End: 2477310
Strand: Reverse
Name: 89054972
Synonym: Jann_2481
Alternate gene names: NA
Gene position: 2477310-2477011 (Counterclockwise)
Preceding gene: 89054973
Following gene: 89054971
Centisome position: 57.37
GC content: 62.67
Gene sequence:
>300_bases TTGCAGGAGCAGGAGTTGATCGGAGAGGTCATCGTCGTCGGGCCGTTCATTCCCAGCCAGGGACAGGCGCTGATGAATGC GGGCGTCATCACGGGTGGCTTTCTGTGGAACCCGCAGGATGCGGGCTATGGGATGGTATCGCTTGGCAAAGTTCTGGCCG AGGGCGGTGAAGTGACGGACGGCATGACCCTCCCCGGTCTGGGGCCGGTGGACGTGGTTTGGGACCTCAGGTCGCGGCGT GCGAACGCGCAGATCGACCTGAACCCCGATAGCATCGACATGTGGGCCGAGATCATCTGA
Upstream 100 bases:
>100_bases TCTATTCACCTGGAGGAGAGAACCATGTCCAGACAAACACATCGAACTCTGCTGAAAAACAGTCTTGCGGTGGGGGCCGC AGGCCCAATCGGAGCGTGCC
Downstream 100 bases:
>100_bases GTGCCAAACGTCACCTCCGGCGGGCAGACCGGACCAAGGCGCCAGCTTGCCCGCCATATGTCTTTCCCGATTTATGAACG AGATACCAAGACCATGTTGC
Product: putative ABC transporter periplasmic sugar-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MQEQELIGEVIVVGPFIPSQGQALMNAGVITGGFLWNPQDAGYGMVSLGKVLAEGGEVTDGMTLPGLGPVDVVWDLRSRR ANAQIDLNPDSIDMWAEII
Sequences:
>Translated_99_residues MQEQELIGEVIVVGPFIPSQGQALMNAGVITGGFLWNPQDAGYGMVSLGKVLAEGGEVTDGMTLPGLGPVDVVWDLRSRR ANAQIDLNPDSIDMWAEII >Mature_99_residues MQEQELIGEVIVVGPFIPSQGQALMNAGVITGGFLWNPQDAGYGMVSLGKVLAEGGEVTDGMTLPGLGPVDVVWDLRSRR ANAQIDLNPDSIDMWAEII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10538; Mature: 10538
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEQELIGEVIVVGPFIPSQGQALMNAGVITGGFLWNPQDAGYGMVSLGKVLAEGGEVTD CCCHHHHCEEEEEECCCCCCCCHHHHCCEEECCEEECCCCCCCCHHHHHHHHHCCCCCCC GMTLPGLGPVDVVWDLRSRRANAQIDLNPDSIDMWAEII CEECCCCCCHHHEEECCCCCCCCEEEECCCCHHHHEECC >Mature Secondary Structure MQEQELIGEVIVVGPFIPSQGQALMNAGVITGGFLWNPQDAGYGMVSLGKVLAEGGEVTD CCCHHHHCEEEEEECCCCCCCCHHHHCCEEECCEEECCCCCCCCHHHHHHHHHCCCCCCC GMTLPGLGPVDVVWDLRSRRANAQIDLNPDSIDMWAEII CEECCCCCCHHHEEECCCCCCCCEEEECCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA