| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054957
Identifier: 89054957
GI number: 89054957
Start: 2461238
End: 2461702
Strand: Direct
Name: 89054957
Synonym: Jann_2466
Alternate gene names: NA
Gene position: 2461238-2461702 (Clockwise)
Preceding gene: 89054956
Following gene: 89054958
Centisome position: 57.0
GC content: 66.02
Gene sequence:
>465_bases ATGGTGCACCCGGCCCTCCTCGCGACGCTCTTCGCAGCCGCACCGTTCGGGCCAGCGGCCTGGGCCGACGACCTCGACCC AGACCTTCTGACCTGCATGGGCCATTTCGAGTATCTGGCCAGCGTCTGGGAAGAGGACCTAGAACAGCAAACCCAAAATG CGCCCGAGACGGTCCAGCTGGTCCATCAACTCAGCGCCAATTGGGAAGCCTTCGGCCATCTTCTGGGCACCCAGGACAAT TGCGAGACCCCCTACGCGGAGGTCCGCGACCGGGCCACGCAAGCGACGGTCGACATCTTTGAGGAAGAACAGCGCCGCCT GACCGCCGGCGAAAGCTACGAGACCGTCTATGCGGACATCTGGGACCGTGCGGTCGCCTGCTCTGCCGCCATCGGCAATG ACCGGTTGGCCGAAGCGTCCCGCGCCGTCGCCGCTGACGGGCCGCCCTGTGGGTGGGGCCAATGA
Upstream 100 bases:
>100_bases CCCACCCGGCCCTGCCCCCCGCGCTGGCGCTGATGAGCCTCGTGCTTGGTCTGAACCTTCTGGCCGACGGTTTGCGCGAA GAGAGCTTGAAGGATTGATG
Downstream 100 bases:
>100_bases TGTCGGGTGCGTGTAGTTACAGAAAAACTACAGGTTCACTACAGGATAATTATGGGGCCAAACGGTCCGATTGGGAGACA AGTTAATGGCAGATCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVHPALLATLFAAAPFGPAAWADDLDPDLLTCMGHFEYLASVWEEDLEQQTQNAPETVQLVHQLSANWEAFGHLLGTQDN CETPYAEVRDRATQATVDIFEEEQRRLTAGESYETVYADIWDRAVACSAAIGNDRLAEASRAVAADGPPCGWGQ
Sequences:
>Translated_154_residues MVHPALLATLFAAAPFGPAAWADDLDPDLLTCMGHFEYLASVWEEDLEQQTQNAPETVQLVHQLSANWEAFGHLLGTQDN CETPYAEVRDRATQATVDIFEEEQRRLTAGESYETVYADIWDRAVACSAAIGNDRLAEASRAVAADGPPCGWGQ >Mature_154_residues MVHPALLATLFAAAPFGPAAWADDLDPDLLTCMGHFEYLASVWEEDLEQQTQNAPETVQLVHQLSANWEAFGHLLGTQDN CETPYAEVRDRATQATVDIFEEEQRRLTAGESYETVYADIWDRAVACSAAIGNDRLAEASRAVAADGPPCGWGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16854; Mature: 16854
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHPALLATLFAAAPFGPAAWADDLDPDLLTCMGHFEYLASVWEEDLEQQTQNAPETVQL CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VHQLSANWEAFGHLLGTQDNCETPYAEVRDRATQATVDIFEEEQRRLTAGESYETVYADI HHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH WDRAVACSAAIGNDRLAEASRAVAADGPPCGWGQ HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVHPALLATLFAAAPFGPAAWADDLDPDLLTCMGHFEYLASVWEEDLEQQTQNAPETVQL CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VHQLSANWEAFGHLLGTQDNCETPYAEVRDRATQATVDIFEEEQRRLTAGESYETVYADI HHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH WDRAVACSAAIGNDRLAEASRAVAADGPPCGWGQ HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA