| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054936
Identifier: 89054936
GI number: 89054936
Start: 2437251
End: 2437523
Strand: Reverse
Name: 89054936
Synonym: Jann_2445
Alternate gene names: NA
Gene position: 2437523-2437251 (Counterclockwise)
Preceding gene: 89054937
Following gene: 89054934
Centisome position: 56.45
GC content: 64.1
Gene sequence:
>273_bases ATGAAAGACCGAGACCCAAACGACCCCAAGGGTCTGATCCGAGAGGCCTTTCGCATCGACGGCATCACCGCGCCGGAGTG TCGGTCGATCTTCGTGGATTGGGCGCTGAGCGTGCCATCGGATGATCACGCGCCGATGATTGAAGCGCTTCTGGCCCGCC ATGAAAATGATCCTGCGGACCACCCGATGAAGGTCGTGCTGGCGGAAGGGTTGGACGCCAAGCCACCAGTCGGGCGACGC GGGGGGCGGGCGGCGCGGTTCAAGGACGGGTAG
Upstream 100 bases:
>100_bases TGACGTCTCCGGAGGATCTTGTGACGCAGCTTGACCAGTATCGGGCGCAAGCAGCCGATATCGTGGCCAAAATTCTGCCC AAGACCGAAGGACGGCCGCA
Downstream 100 bases:
>100_bases CGGGGCCGCGCCGTCACACTTTGGCGCGGGCCGCGTGGCTGCCACGCTCGCGGTAGGGTGTAGTGTCGTAATGGGCCCGA TAGCATTTGGAAAAATGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKDRDPNDPKGLIREAFRIDGITAPECRSIFVDWALSVPSDDHAPMIEALLARHENDPADHPMKVVLAEGLDAKPPVGRR GGRAARFKDG
Sequences:
>Translated_90_residues MKDRDPNDPKGLIREAFRIDGITAPECRSIFVDWALSVPSDDHAPMIEALLARHENDPADHPMKVVLAEGLDAKPPVGRR GGRAARFKDG >Mature_90_residues MKDRDPNDPKGLIREAFRIDGITAPECRSIFVDWALSVPSDDHAPMIEALLARHENDPADHPMKVVLAEGLDAKPPVGRR GGRAARFKDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9898; Mature: 9898
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDRDPNDPKGLIREAFRIDGITAPECRSIFVDWALSVPSDDHAPMIEALLARHENDPAD CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCC HPMKVVLAEGLDAKPPVGRRGGRAARFKDG CCEEEHEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKDRDPNDPKGLIREAFRIDGITAPECRSIFVDWALSVPSDDHAPMIEALLARHENDPAD CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCC HPMKVVLAEGLDAKPPVGRRGGRAARFKDG CCEEEHEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA