Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054888

Identifier: 89054888

GI number: 89054888

Start: 2398267

End: 2399478

Strand: Reverse

Name: 89054888

Synonym: Jann_2397

Alternate gene names: NA

Gene position: 2399478-2398267 (Counterclockwise)

Preceding gene: 89054889

Following gene: 89054887

Centisome position: 55.57

GC content: 64.85

Gene sequence:

>1212_bases
ATGACGCAGGTGTCCCGCAGACATGTCCTTTATATCCCCGGCTTTGACCCGGTGCCCCCGCGCGCCTACCGGGAGCGGTA
CCGGCGGGAGGCTTTGAAGCAAGCGGAGATGTCAGGCTTCGAGATTGCCCAGGGCCCGGCGGCGGAAGACAGGCGGTTTG
GCTGGCGTGTTGACGCTATGATGGACGGGGCGTCCGTGCGCGCGGATATGGAGATTCTTTACTGGGCCGACATCGTGCGC
GATGGCATGGCGTCGGGCGTTGCGCGGACCTATGGGCAACTGGCGCGCACGGCGTGGATCTACATCGGCTCGGGCGCGCT
GTTTCGGCTGATGCGGTTGCGCAAGGGACCGGTGATTGCGGCTCTTTATCCGGTCGCGGTCCTCCTCGGGCAAGCCCTCC
TCGCAGGGATGCTGGCCTATGCGGTCTTTGCTTTGGGGCGGGTGGTTTTAGGGGCCGGGTGGCTGTCGGTGTTGGGGGCG
CTGGCGGGGGGCGGTGCGGCGGCGATGTTGCTGCGGTGGTGCGCGCGCAGGGATCATCTTTTGGCCTGGTATCTGATGAA
GGACTACGCCTTTGCGGCGCGTCTGCGCGGTGCCTATCCGCCGGAGCAGGAGGTCCGCATGGCGGACTTCGCCGACCGGA
TCGCCGAGGCGCTGCAAGGCGATGTGGATGAGGTGCTTGTCGTCGGCCATTCCTCTGGCGCGTATATGGCCGTGTCGGTT
CTGGCGGATTTGATCCGGGCGGGGCGACGGCCCAAAGATGGCCCGGTTCTGTCGCTTCTCACCCTTGGCCAGGTGGTGCC
GATGGTCAGCTTCCTGCCAGAGGCCACGCGGTTGCGAGCGGATCTGGCGGTCCTGTCGGTGCAAGAGCTGGCCTGGGTCG
ATGTCACGGCCCCCGGCGACGGTTGTTCCTTCGCACTGTGTGACCCCGTGGCCGTGTCCGGTGTTGCACCTGCTGACAAA
ACCGGTCCCCTGGTGATCTCTGCGGCCTTCACGCAAACGCTGTCCGCTGCGCGGCAAAAGGCCCTGAAGTGGCGGTTGTT
CGAGTTGCATTTTCAGTATCTGAACGCCTTTGACGCGCTCCCAGATCGCCCGGACGCCTATGATTACTTTCGCGTCACCG
CAGGGCCGATGACTTTGGGCGACCGTTTTGCCACCCGCGCACCGTCCAAAAGCCGGATTGAGACGCCGGTCAGCGGGTTT
ACCGACATATGA

Upstream 100 bases:

>100_bases
GGCTGCTGGAGACCTTCCCCGCGCTGGGTCAATTGGGCTGACGTCACACCTTGGTGTGTCTGGCCCTTCCGCTACCAAAA
TCCGTGGCTATGCTGCGCCC

Downstream 100 bases:

>100_bases
ATGATCTGCCGCCGAAACCGCCCGCGCGGGCCGATCATGTGTCCCTGTGGCGCCATATGAAGCTGTTCCGGCAAGACATC
CTGTCTGCGCAGCCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MTQVSRRHVLYIPGFDPVPPRAYRERYRREALKQAEMSGFEIAQGPAAEDRRFGWRVDAMMDGASVRADMEILYWADIVR
DGMASGVARTYGQLARTAWIYIGSGALFRLMRLRKGPVIAALYPVAVLLGQALLAGMLAYAVFALGRVVLGAGWLSVLGA
LAGGGAAAMLLRWCARRDHLLAWYLMKDYAFAARLRGAYPPEQEVRMADFADRIAEALQGDVDEVLVVGHSSGAYMAVSV
LADLIRAGRRPKDGPVLSLLTLGQVVPMVSFLPEATRLRADLAVLSVQELAWVDVTAPGDGCSFALCDPVAVSGVAPADK
TGPLVISAAFTQTLSAARQKALKWRLFELHFQYLNAFDALPDRPDAYDYFRVTAGPMTLGDRFATRAPSKSRIETPVSGF
TDI

Sequences:

>Translated_403_residues
MTQVSRRHVLYIPGFDPVPPRAYRERYRREALKQAEMSGFEIAQGPAAEDRRFGWRVDAMMDGASVRADMEILYWADIVR
DGMASGVARTYGQLARTAWIYIGSGALFRLMRLRKGPVIAALYPVAVLLGQALLAGMLAYAVFALGRVVLGAGWLSVLGA
LAGGGAAAMLLRWCARRDHLLAWYLMKDYAFAARLRGAYPPEQEVRMADFADRIAEALQGDVDEVLVVGHSSGAYMAVSV
LADLIRAGRRPKDGPVLSLLTLGQVVPMVSFLPEATRLRADLAVLSVQELAWVDVTAPGDGCSFALCDPVAVSGVAPADK
TGPLVISAAFTQTLSAARQKALKWRLFELHFQYLNAFDALPDRPDAYDYFRVTAGPMTLGDRFATRAPSKSRIETPVSGF
TDI
>Mature_402_residues
TQVSRRHVLYIPGFDPVPPRAYRERYRREALKQAEMSGFEIAQGPAAEDRRFGWRVDAMMDGASVRADMEILYWADIVRD
GMASGVARTYGQLARTAWIYIGSGALFRLMRLRKGPVIAALYPVAVLLGQALLAGMLAYAVFALGRVVLGAGWLSVLGAL
AGGGAAAMLLRWCARRDHLLAWYLMKDYAFAARLRGAYPPEQEVRMADFADRIAEALQGDVDEVLVVGHSSGAYMAVSVL
ADLIRAGRRPKDGPVLSLLTLGQVVPMVSFLPEATRLRADLAVLSVQELAWVDVTAPGDGCSFALCDPVAVSGVAPADKT
GPLVISAAFTQTLSAARQKALKWRLFELHFQYLNAFDALPDRPDAYDYFRVTAGPMTLGDRFATRAPSKSRIETPVSGFT
DI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43918; Mature: 43787

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVSRRHVLYIPGFDPVPPRAYRERYRREALKQAEMSGFEIAQGPAAEDRRFGWRVDAM
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEHHH
MDGASVRADMEILYWADIVRDGMASGVARTYGQLARTAWIYIGSGALFRLMRLRKGPVIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCHH
ALYPVAVLLGQALLAGMLAYAVFALGRVVLGAGWLSVLGALAGGGAAAMLLRWCARRDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
LAWYLMKDYAFAARLRGAYPPEQEVRMADFADRIAEALQGDVDEVLVVGHSSGAYMAVSV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
LADLIRAGRRPKDGPVLSLLTLGQVVPMVSFLPEATRLRADLAVLSVQELAWVDVTAPGD
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCC
GCSFALCDPVAVSGVAPADKTGPLVISAAFTQTLSAARQKALKWRLFELHFQYLNAFDAL
CCCEEEECCHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDRPDAYDYFRVTAGPMTLGDRFATRAPSKSRIETPVSGFTDI
CCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQVSRRHVLYIPGFDPVPPRAYRERYRREALKQAEMSGFEIAQGPAAEDRRFGWRVDAM
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEHHH
MDGASVRADMEILYWADIVRDGMASGVARTYGQLARTAWIYIGSGALFRLMRLRKGPVIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCHH
ALYPVAVLLGQALLAGMLAYAVFALGRVVLGAGWLSVLGALAGGGAAAMLLRWCARRDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
LAWYLMKDYAFAARLRGAYPPEQEVRMADFADRIAEALQGDVDEVLVVGHSSGAYMAVSV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
LADLIRAGRRPKDGPVLSLLTLGQVVPMVSFLPEATRLRADLAVLSVQELAWVDVTAPGD
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCC
GCSFALCDPVAVSGVAPADKTGPLVISAAFTQTLSAARQKALKWRLFELHFQYLNAFDAL
CCCEEEECCHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDRPDAYDYFRVTAGPMTLGDRFATRAPSKSRIETPVSGFTDI
CCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA