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The map label for this gene is yafJ [C]

Identifier: 89054866

GI number: 89054866

Start: 2380316

End: 2381098

Strand: Reverse

Name: yafJ [C]

Synonym: Jann_2375

Alternate gene names: 89054866

Gene position: 2381098-2380316 (Counterclockwise)

Preceding gene: 89054867

Following gene: 89054861

Centisome position: 55.14

GC content: 64.62

Gene sequence:

>783_bases
ATGTGTCGGTGGGCCGCGTATCTGGGCCAGGCGATCTATCTTGAGGAATTATTAACCGCGCCCGGGCATTCCTTGATTGA
CCAAAGCCGCGCCGCGACCGAATGCAAGACAGCGATCAACGCCGATGGCTTCGGCGTCGCGTGGTATGGCGACCGGCCCG
ATCCGGGCCTCTACCGGGATGTCTTCCCGGCGTGGTCGGACCCAAACCTCGCCTCGCTCGCGCGGACCTTGAAAAGCCAC
GCCTTTCTGTCCCATGTCCGCGCCTCCACCGGGGCCGCGACCAGCCGCAACAATTGCCACCCCTTCGCCCATGGGCGGTG
GAGTTTCATGCACAATGGTCAGATCGGCGGCTTTGATCGGTTCCGGCGGCGGGCCGATATGGGCGTGTCCGATCCGCTTT
ATGCCCACCGCAAAGGCGCGACGGATAGTGAATTGCTGTTCCTGTACGCGTTGGATTTTGGACTGGAGGCGGACCCGATC
GGCGCCGTCCTGCTAGCCCACCGCAGGCTGGAGCAGATGTCGCGGGAGACCGGCACAACGCCCCATCTGCGCAGCTCTGC
GGCGTGGAGTGATGGAACACGGCTCTATGCGCTGCGCCTCAGTTCAGATCACATCGCGCCGTCCGTATATTATCGCTGGA
GCAAAAGCCGGACGGGATGGGCCGTCGTCTCGGAGCCGCTGGAGGTGGGGCAGGGCGGATGGACCGAGCTGCCGCCGGGC
CACAGCGCGATGTTTGAAGGCGCGCAGGTCTGGGTGGAGCCCGTTGCAGCGATGGCCGCTTAG

Upstream 100 bases:

>100_bases
GGCTGCGGCGGTCCATGCGCTGATCCCGTGCCTGTTTGAAAAGACCGCTAGCCGGATCATTGCGGATCTCTACGCCAAGA
CCCACAACCGGGGCGCGTGA

Downstream 100 bases:

>100_bases
GGTCCGAAACCCACGGTCGGGACATGACGGGTCGTAAAAGCGACGGCCCCTGAACCGCCACGTGGTTCACGCCACAGCCC
GCCCAGACGTCAGAGATGCG

Product: glutamine amidotransferase, class-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MCRWAAYLGQAIYLEELLTAPGHSLIDQSRAATECKTAINADGFGVAWYGDRPDPGLYRDVFPAWSDPNLASLARTLKSH
AFLSHVRASTGAATSRNNCHPFAHGRWSFMHNGQIGGFDRFRRRADMGVSDPLYAHRKGATDSELLFLYALDFGLEADPI
GAVLLAHRRLEQMSRETGTTPHLRSSAAWSDGTRLYALRLSSDHIAPSVYYRWSKSRTGWAVVSEPLEVGQGGWTELPPG
HSAMFEGAQVWVEPVAAMAA

Sequences:

>Translated_260_residues
MCRWAAYLGQAIYLEELLTAPGHSLIDQSRAATECKTAINADGFGVAWYGDRPDPGLYRDVFPAWSDPNLASLARTLKSH
AFLSHVRASTGAATSRNNCHPFAHGRWSFMHNGQIGGFDRFRRRADMGVSDPLYAHRKGATDSELLFLYALDFGLEADPI
GAVLLAHRRLEQMSRETGTTPHLRSSAAWSDGTRLYALRLSSDHIAPSVYYRWSKSRTGWAVVSEPLEVGQGGWTELPPG
HSAMFEGAQVWVEPVAAMAA
>Mature_260_residues
MCRWAAYLGQAIYLEELLTAPGHSLIDQSRAATECKTAINADGFGVAWYGDRPDPGLYRDVFPAWSDPNLASLARTLKSH
AFLSHVRASTGAATSRNNCHPFAHGRWSFMHNGQIGGFDRFRRRADMGVSDPLYAHRKGATDSELLFLYALDFGLEADPI
GAVLLAHRRLEQMSRETGTTPHLRSSAAWSDGTRLYALRLSSDHIAPSVYYRWSKSRTGWAVVSEPLEVGQGGWTELPPG
HSAMFEGAQVWVEPVAAMAA

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324138, Length=303, Percent_Identity=31.6831683168317, Blast_Score=122, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017808
- InterPro:   IPR017932 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28619; Mature: 28619

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRWAAYLGQAIYLEELLTAPGHSLIDQSRAATECKTAINADGFGVAWYGDRPDPGLYRD
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH
VFPAWSDPNLASLARTLKSHAFLSHVRASTGAATSRNNCHPFAHGRWSFMHNGQIGGFDR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHH
FRRRADMGVSDPLYAHRKGATDSELLFLYALDFGLEADPIGAVLLAHRRLEQMSRETGTT
HHHHHCCCCCCCHHHHCCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PHLRSSAAWSDGTRLYALRLSSDHIAPSVYYRWSKSRTGWAVVSEPLEVGQGGWTELPPG
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEECCHHHHCCCCCCCCCCC
HSAMFEGAQVWVEPVAAMAA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCRWAAYLGQAIYLEELLTAPGHSLIDQSRAATECKTAINADGFGVAWYGDRPDPGLYRD
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH
VFPAWSDPNLASLARTLKSHAFLSHVRASTGAATSRNNCHPFAHGRWSFMHNGQIGGFDR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHH
FRRRADMGVSDPLYAHRKGATDSELLFLYALDFGLEADPIGAVLLAHRRLEQMSRETGTT
HHHHHCCCCCCCHHHHCCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PHLRSSAAWSDGTRLYALRLSSDHIAPSVYYRWSKSRTGWAVVSEPLEVGQGGWTELPPG
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCEEECCHHHHCCCCCCCCCCC
HSAMFEGAQVWVEPVAAMAA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]