| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is uspG [H]
Identifier: 89054820
GI number: 89054820
Start: 2335818
End: 2336249
Strand: Reverse
Name: uspG [H]
Synonym: Jann_2329
Alternate gene names: 89054820
Gene position: 2336249-2335818 (Counterclockwise)
Preceding gene: 89054821
Following gene: 89054819
Centisome position: 54.11
GC content: 61.11
Gene sequence:
>432_bases ATGTTCAAAACAATCCTTCTGCCCGTCGATCTGTCCTCGCCCGAGAGCTGGAGCAAGGCCCTGCCAGCGGCGAGAGATCT GATGGCAAGCGGCGAATGCGTCCTGCACGTGCTCTGCGTGGTGCCCGATTTTGGTCTGCCCGTCGTGGGGAGTTTCTTTG ATGAGGGGTTTGAGGAAAACGCCATGCACCGCGTGGGCGAGGCCTTGACCGTCTGGGTCCATGACAACATTCCGGCAGAC CTTAACGTGCAGCCCCATGTCACCCATGGACGGGTCTACGACGAAATCCTGCGGGCCGCCGACAAGCTCAGCGCCGACGC AATCGTTATGGGGGCCCATACGCCTGAAATCAGCGACTATCTTCTGGGTCCCAACGCCGCCCGCGTGGTCCGCCACGCCA AGCAATCGGTCTTTGTGGTGCGGGGCAAGTGA
Upstream 100 bases:
>100_bases TGCTGCAACGGCGCAGGCAAACCAAACCGGCCTTCTAGACAGGCCGCCACGCTAACCGGCCTTCCGAGGTCACCCAAAGG GCCCTCCACGGAGACGTCAT
Downstream 100 bases:
>100_bases CGCAAACGCCCGGGACCCACGTCTTCGGGCGGTCAAACGCCACCCTTCGGCGGGCCGTTTCGGGGGAGGGTTGCTACATC ATCGACGCGGATGGCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MFKTILLPVDLSSPESWSKALPAARDLMASGECVLHVLCVVPDFGLPVVGSFFDEGFEENAMHRVGEALTVWVHDNIPAD LNVQPHVTHGRVYDEILRAADKLSADAIVMGAHTPEISDYLLGPNAARVVRHAKQSVFVVRGK
Sequences:
>Translated_143_residues MFKTILLPVDLSSPESWSKALPAARDLMASGECVLHVLCVVPDFGLPVVGSFFDEGFEENAMHRVGEALTVWVHDNIPAD LNVQPHVTHGRVYDEILRAADKLSADAIVMGAHTPEISDYLLGPNAARVVRHAKQSVFVVRGK >Mature_143_residues MFKTILLPVDLSSPESWSKALPAARDLMASGECVLHVLCVVPDFGLPVVGSFFDEGFEENAMHRVGEALTVWVHDNIPAD LNVQPHVTHGRVYDEILRAADKLSADAIVMGAHTPEISDYLLGPNAARVVRHAKQSVFVVRGK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
Organism=Escherichia coli, GI1786824, Length=143, Percent_Identity=37.0629370629371, Blast_Score=84, Evalue=5e-18, Organism=Escherichia coli, GI87081893, Length=150, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15597; Mature: 15597
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKTILLPVDLSSPESWSKALPAARDLMASGECVLHVLCVVPDFGLPVVGSFFDEGFEEN CCCEEEEEEECCCCCHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCHH AMHRVGEALTVWVHDNIPADLNVQPHVTHGRVYDEILRAADKLSADAIVMGAHTPEISDY HHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHH LLGPNAARVVRHAKQSVFVVRGK HCCCCHHHHHHHHHHCEEEEECC >Mature Secondary Structure MFKTILLPVDLSSPESWSKALPAARDLMASGECVLHVLCVVPDFGLPVVGSFFDEGFEEN CCCEEEEEEECCCCCHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCHH AMHRVGEALTVWVHDNIPADLNVQPHVTHGRVYDEILRAADKLSADAIVMGAHTPEISDY HHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHH LLGPNAARVVRHAKQSVFVVRGK HCCCCHHHHHHHHHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]