| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054790
Identifier: 89054790
GI number: 89054790
Start: 2305203
End: 2305598
Strand: Direct
Name: 89054790
Synonym: Jann_2299
Alternate gene names: NA
Gene position: 2305203-2305598 (Clockwise)
Preceding gene: 89054785
Following gene: 89054791
Centisome position: 53.39
GC content: 65.66
Gene sequence:
>396_bases ATGAGCCTGAAAATCACTGCCGCCCAAATGGTTGCCGAGGCCCGCGCCCGGATTGAAGAGGTCGAGACGCCGGATCTGAT CGCGCAACTGACTGACCCGGATGTCATCGTCGTTGATATCCGCGACATCCGGGAGCGGCAGAAGGGCCTCATCCCGGGAT CGGTCCACGCCCCGCGCGGGATGATCGAATTCTGGGTCGACACCGACAGCCCCTACCACAAGCCGGTCTTCGCGCAGGAG GGCAAGCGCTACGTCTTCCACTGCGCGTCCGGCTGGCGGTCGGCCCTGACGGTCGCGACGTTGCAGGATATGGGATTTGC GGCGGCCCATCTGCGCGAAGGGTTCTCCACCTGGGAGGCGCAAGGCGGGCCAGTGGGCATGCCAGAGCCGCGGTAG
Upstream 100 bases:
>100_bases TCGCCGTCTCCCCGGACGATCTTTGCCCTGAGGTTGCGGCCCGCTCCCGGCGCGGTCAATGTGCGTTAACGCTATCTGCG ACACAATAGGAGCTGACCGG
Downstream 100 bases:
>100_bases ACACGGGCGGGCGGCTCCAACGACGACTCGACGCACGGACAGGTTTGAATATATGGTGCGCCCAAAGGGATTTAGACGCA TGAAGATATCTGTTTTCAAC
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein Sulfur Transferase; Rhodanese-Like Domain Protein
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSLKITAAQMVAEARARIEEVETPDLIAQLTDPDVIVVDIRDIRERQKGLIPGSVHAPRGMIEFWVDTDSPYHKPVFAQE GKRYVFHCASGWRSALTVATLQDMGFAAAHLREGFSTWEAQGGPVGMPEPR
Sequences:
>Translated_131_residues MSLKITAAQMVAEARARIEEVETPDLIAQLTDPDVIVVDIRDIRERQKGLIPGSVHAPRGMIEFWVDTDSPYHKPVFAQE GKRYVFHCASGWRSALTVATLQDMGFAAAHLREGFSTWEAQGGPVGMPEPR >Mature_130_residues SLKITAAQMVAEARARIEEVETPDLIAQLTDPDVIVVDIRDIRERQKGLIPGSVHAPRGMIEFWVDTDSPYHKPVFAQEG KRYVFHCASGWRSALTVATLQDMGFAAAHLREGFSTWEAQGGPVGMPEPR
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14531; Mature: 14400
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKITAAQMVAEARARIEEVETPDLIAQLTDPDVIVVDIRDIRERQKGLIPGSVHAPRG CCEEHHHHHHHHHHHHHHHHCCCCHHHEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCC MIEFWVDTDSPYHKPVFAQEGKRYVFHCASGWRSALTVATLQDMGFAAAHLREGFSTWEA EEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCHHHHCC QGGPVGMPEPR CCCCCCCCCCC >Mature Secondary Structure SLKITAAQMVAEARARIEEVETPDLIAQLTDPDVIVVDIRDIRERQKGLIPGSVHAPRG CEEHHHHHHHHHHHHHHHHCCCCHHHEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCC MIEFWVDTDSPYHKPVFAQEGKRYVFHCASGWRSALTVATLQDMGFAAAHLREGFSTWEA EEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCHHHHCC QGGPVGMPEPR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA