| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054743
Identifier: 89054743
GI number: 89054743
Start: 2259715
End: 2259987
Strand: Reverse
Name: 89054743
Synonym: Jann_2252
Alternate gene names: NA
Gene position: 2259987-2259715 (Counterclockwise)
Preceding gene: 89054744
Following gene: 89054742
Centisome position: 52.34
GC content: 64.84
Gene sequence:
>273_bases ATGAAACGGAATCTGGGACGCACGACCCTCCGGCGCAGGCGGCGGACAGGGGCACCAATGGATGCCTTTGACACCCTGCC TGCTCCGTTGCGGCGATGGCTGTGCGATGCGGCTCTTCCGTGGTCCCCGGCCTCCGCCCGTCGCATCTGGACGAAGTCTC TGGCCAAGGGACGCACGCCCGATGAAGCGTTGGAGACCCTTTCACGGGCCGAGGCGCGCACGCTGGCCCGCGACAAACAC GCCATTTTACTTGAACACGAGGCCCATATCTGA
Upstream 100 bases:
>100_bases CTCCGTCCGGTGTGCTCCACCGATCGCCTCCCATCGCGGGAACGGGCGAAACGCGGCTTGTGATGGTCCTGGACCCGATT TTCGATCCGGATAACGGCCC
Downstream 100 bases:
>100_bases CGGAACCTCTGGTTAGTTGCGTGGCCCTCCCGACAGGCGCGGGTCTTCTATCAAGACCGCACCTCATCCCATCGACGGCT TCAAAAGTGGGCGCGACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKRNLGRTTLRRRRRTGAPMDAFDTLPAPLRRWLCDAALPWSPASARRIWTKSLAKGRTPDEALETLSRAEARTLARDKH AILLEHEAHI
Sequences:
>Translated_90_residues MKRNLGRTTLRRRRRTGAPMDAFDTLPAPLRRWLCDAALPWSPASARRIWTKSLAKGRTPDEALETLSRAEARTLARDKH AILLEHEAHI >Mature_90_residues MKRNLGRTTLRRRRRTGAPMDAFDTLPAPLRRWLCDAALPWSPASARRIWTKSLAKGRTPDEALETLSRAEARTLARDKH AILLEHEAHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10295; Mature: 10295
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNLGRTTLRRRRRTGAPMDAFDTLPAPLRRWLCDAALPWSPASARRIWTKSLAKGRTP CCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH DEALETLSRAEARTLARDKHAILLEHEAHI HHHHHHHHHHHHHHHHHCCCCEEECCCCCC >Mature Secondary Structure MKRNLGRTTLRRRRRTGAPMDAFDTLPAPLRRWLCDAALPWSPASARRIWTKSLAKGRTP CCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH DEALETLSRAEARTLARDKHAILLEHEAHI HHHHHHHHHHHHHHHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA