| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054706
Identifier: 89054706
GI number: 89054706
Start: 2222416
End: 2222664
Strand: Direct
Name: 89054706
Synonym: Jann_2215
Alternate gene names: NA
Gene position: 2222416-2222664 (Clockwise)
Preceding gene: 89054705
Following gene: 89054707
Centisome position: 51.47
GC content: 59.44
Gene sequence:
>249_bases ATGTCCATCCTCTGGACCATCATCATCGGCTTTATCGCGGGCGTCATCGCAAAGTTCATCACGCCCGGCGACAATGAGCC GTCCGGCTTCATCATGACGACCATTCTTGGCGTCATCGGCGCGTTTGTCGCCAACTTTATCTTCGGCGCGCTCGGTTGGG GTGACGGCAGCGTTGGCCTCATCGGGTCCGTGTTCGGCGCGGTGATCGTATTGCTCGCATGGGCCGCGTTTCAACGCCGC AACGCATAA
Upstream 100 bases:
>100_bases AGGCAGCTCGTCGGGCGCGCGCGATCCGGGTGGCGGTGCATTGGAACCATCCTCACGGTCCCGCGTTAACCTCAAAACAT ATCCTCACGGGAGAGAAAAC
Downstream 100 bases:
>100_bases CCGTCTGAACTTCAAACAGGAGACTTCCCATGGCCCGTCGTGGACCATCCCTCACAGCCCTTCTTGGCCTGCTGGCCGTC GCAGGTTACCAGAACCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGLIGSVFGAVIVLLAWAAFQRR NA
Sequences:
>Translated_82_residues MSILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGLIGSVFGAVIVLLAWAAFQRR NA >Mature_81_residues SILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGLIGSVFGAVIVLLAWAAFQRRN A
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8530; Mature: 8399
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IGSVFGAVIVLLAWAAFQRRNA HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IGSVFGAVIVLLAWAAFQRRNA HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA