Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054706

Identifier: 89054706

GI number: 89054706

Start: 2222416

End: 2222664

Strand: Direct

Name: 89054706

Synonym: Jann_2215

Alternate gene names: NA

Gene position: 2222416-2222664 (Clockwise)

Preceding gene: 89054705

Following gene: 89054707

Centisome position: 51.47

GC content: 59.44

Gene sequence:

>249_bases
ATGTCCATCCTCTGGACCATCATCATCGGCTTTATCGCGGGCGTCATCGCAAAGTTCATCACGCCCGGCGACAATGAGCC
GTCCGGCTTCATCATGACGACCATTCTTGGCGTCATCGGCGCGTTTGTCGCCAACTTTATCTTCGGCGCGCTCGGTTGGG
GTGACGGCAGCGTTGGCCTCATCGGGTCCGTGTTCGGCGCGGTGATCGTATTGCTCGCATGGGCCGCGTTTCAACGCCGC
AACGCATAA

Upstream 100 bases:

>100_bases
AGGCAGCTCGTCGGGCGCGCGCGATCCGGGTGGCGGTGCATTGGAACCATCCTCACGGTCCCGCGTTAACCTCAAAACAT
ATCCTCACGGGAGAGAAAAC

Downstream 100 bases:

>100_bases
CCGTCTGAACTTCAAACAGGAGACTTCCCATGGCCCGTCGTGGACCATCCCTCACAGCCCTTCTTGGCCTGCTGGCCGTC
GCAGGTTACCAGAACCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGLIGSVFGAVIVLLAWAAFQRR
NA

Sequences:

>Translated_82_residues
MSILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGLIGSVFGAVIVLLAWAAFQRR
NA
>Mature_81_residues
SILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGLIGSVFGAVIVLLAWAAFQRRN
A

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8530; Mature: 8399

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IGSVFGAVIVLLAWAAFQRRNA
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SILWTIIIGFIAGVIAKFITPGDNEPSGFIMTTILGVIGAFVANFIFGALGWGDGSVGL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IGSVFGAVIVLLAWAAFQRRNA
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA