| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054689
Identifier: 89054689
GI number: 89054689
Start: 2207845
End: 2208759
Strand: Direct
Name: 89054689
Synonym: Jann_2198
Alternate gene names: NA
Gene position: 2207845-2208759 (Clockwise)
Preceding gene: 89054686
Following gene: 89054690
Centisome position: 51.13
GC content: 66.89
Gene sequence:
>915_bases ATGGTCCAAGGCGGGGTAAGTCGGTCGGAACAATACGTGATCCGGGGTGGAGCGGCGTCCATGGCCAATACCGACAGTTT TATTGATGAAGTCAGCGAAGAGGTCCGCCGCGACCGTCTTTACGCGCTGATGCGGCGGTGGGGTTGGATCCCCATTCTGG TCGTGATCGCAATCGTTGGCGGTGCTGCCTATTTTGAATGGCAGAACGCTCAGCAACGTGCGCAGGCCGAAGCCTTTGGC GATGCGCTTCTCAGCGCGCTTGATAACGAAGATACCCAGGCGCGGGTCGCGGCCCTTGAAGCGGTGGACGTTCCGTCGGC AGAGGCGGGGATCATCCTGGCACTTTTGGCCGCGGGCGAAACCGCCAATGGTGAGGATCGGGCAGGCGCGGCGGCCCGTT TGCGGGCGGCGGCAGAGGCACCCGGCGTCGCGCGTCGCTACGTTGATCTGGCGCTTTTGAAGGCAGAAATGCTTGACCCG GCCCCGGAAGCAGAGGCCCGCGCCACGCTGGAGGCGCTCGCCGCCCCCGGCGCGCCGTACTCTGCCTTGGCCGAAGAGCA ACTGGCCCTGATGGAGGTCCGTGCCGGTGATCTGGACGCGGGCCTTGACCGCCTGCGCGCCATCGAGCGGAGCGCGGCGG CAACGGCAGGCTTGCAACAACGCGCCGCGCAGTTGATTGTGGCGTTGGAAAGTGGCGCCGTGCTGGTCGATCCCCCCCTG GACGCTGACCCGGTGGACGACGCGCCGGTCGACGAGGGTGCTGCCGAGCCGGGCTCCGATGGGCTGCCGGAGGATGCAGC GCCTGAAGACGAGGCGCCCGAGGCTGTTGAGGCCGCTGACGGCGAAGGCGCGGATGGCGCAAACTTGGACGGCGCAGACG TGGACGACGCGCCTGCGGGCGAAGACGAAGAATAG
Upstream 100 bases:
>100_bases AACTGAACGGTTCAGAATAGCCTGCAACGGCCGACACTGTCGTGTCCCGTGCCCATGTGCCGATTGTATAGTGGCCCCGG GGGAAGGGGGCCTTGCCCCC
Downstream 100 bases:
>100_bases CGGTCGTGCGCATCAACGCGCCATGCCCGCAAGACGAACAACCTGCGGACCAATGCCCGGCCACAACCTGGCGGACAGAG GTCCCGGAACGAGTGGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFG DALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGETANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDP APEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAGEDEE
Sequences:
>Translated_304_residues MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFG DALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGETANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDP APEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAGEDEE >Mature_304_residues MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFG DALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGETANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDP APEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAGEDEE
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31347; Mature: 31347
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVG CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC GAAYFEWQNAQQRAQAEAFGDALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGE CHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC TANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDPAPEAEARATLEALAAPGAPY CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH SALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCC DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC EDEE CCCC >Mature Secondary Structure MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVG CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC GAAYFEWQNAQQRAQAEAFGDALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGE CHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC TANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDPAPEAEARATLEALAAPGAPY CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH SALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCC DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC EDEE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA