Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054689

Identifier: 89054689

GI number: 89054689

Start: 2207845

End: 2208759

Strand: Direct

Name: 89054689

Synonym: Jann_2198

Alternate gene names: NA

Gene position: 2207845-2208759 (Clockwise)

Preceding gene: 89054686

Following gene: 89054690

Centisome position: 51.13

GC content: 66.89

Gene sequence:

>915_bases
ATGGTCCAAGGCGGGGTAAGTCGGTCGGAACAATACGTGATCCGGGGTGGAGCGGCGTCCATGGCCAATACCGACAGTTT
TATTGATGAAGTCAGCGAAGAGGTCCGCCGCGACCGTCTTTACGCGCTGATGCGGCGGTGGGGTTGGATCCCCATTCTGG
TCGTGATCGCAATCGTTGGCGGTGCTGCCTATTTTGAATGGCAGAACGCTCAGCAACGTGCGCAGGCCGAAGCCTTTGGC
GATGCGCTTCTCAGCGCGCTTGATAACGAAGATACCCAGGCGCGGGTCGCGGCCCTTGAAGCGGTGGACGTTCCGTCGGC
AGAGGCGGGGATCATCCTGGCACTTTTGGCCGCGGGCGAAACCGCCAATGGTGAGGATCGGGCAGGCGCGGCGGCCCGTT
TGCGGGCGGCGGCAGAGGCACCCGGCGTCGCGCGTCGCTACGTTGATCTGGCGCTTTTGAAGGCAGAAATGCTTGACCCG
GCCCCGGAAGCAGAGGCCCGCGCCACGCTGGAGGCGCTCGCCGCCCCCGGCGCGCCGTACTCTGCCTTGGCCGAAGAGCA
ACTGGCCCTGATGGAGGTCCGTGCCGGTGATCTGGACGCGGGCCTTGACCGCCTGCGCGCCATCGAGCGGAGCGCGGCGG
CAACGGCAGGCTTGCAACAACGCGCCGCGCAGTTGATTGTGGCGTTGGAAAGTGGCGCCGTGCTGGTCGATCCCCCCCTG
GACGCTGACCCGGTGGACGACGCGCCGGTCGACGAGGGTGCTGCCGAGCCGGGCTCCGATGGGCTGCCGGAGGATGCAGC
GCCTGAAGACGAGGCGCCCGAGGCTGTTGAGGCCGCTGACGGCGAAGGCGCGGATGGCGCAAACTTGGACGGCGCAGACG
TGGACGACGCGCCTGCGGGCGAAGACGAAGAATAG

Upstream 100 bases:

>100_bases
AACTGAACGGTTCAGAATAGCCTGCAACGGCCGACACTGTCGTGTCCCGTGCCCATGTGCCGATTGTATAGTGGCCCCGG
GGGAAGGGGGCCTTGCCCCC

Downstream 100 bases:

>100_bases
CGGTCGTGCGCATCAACGCGCCATGCCCGCAAGACGAACAACCTGCGGACCAATGCCCGGCCACAACCTGGCGGACAGAG
GTCCCGGAACGAGTGGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFG
DALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGETANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDP
APEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL
DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAGEDEE

Sequences:

>Translated_304_residues
MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFG
DALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGETANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDP
APEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL
DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAGEDEE
>Mature_304_residues
MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFG
DALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGETANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDP
APEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL
DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAGEDEE

Specific function: Unknown

COG id: COG4649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31347; Mature: 31347

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVG
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
GAAYFEWQNAQQRAQAEAFGDALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGE
CHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
TANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDPAPEAEARATLEALAAPGAPY
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
SALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCC
DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
EDEE
CCCC
>Mature Secondary Structure
MVQGGVSRSEQYVIRGGAASMANTDSFIDEVSEEVRRDRLYALMRRWGWIPILVVIAIVG
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
GAAYFEWQNAQQRAQAEAFGDALLSALDNEDTQARVAALEAVDVPSAEAGIILALLAAGE
CHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
TANGEDRAGAAARLRAAAEAPGVARRYVDLALLKAEMLDPAPEAEARATLEALAAPGAPY
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
SALAEEQLALMEVRAGDLDAGLDRLRAIERSAAATAGLQQRAAQLIVALESGAVLVDPPL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCC
DADPVDDAPVDEGAAEPGSDGLPEDAAPEDEAPEAVEAADGEGADGANLDGADVDDAPAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
EDEE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA