Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054564

Identifier: 89054564

GI number: 89054564

Start: 2081849

End: 2082538

Strand: Direct

Name: 89054564

Synonym: Jann_2073

Alternate gene names: NA

Gene position: 2081849-2082538 (Clockwise)

Preceding gene: 89054563

Following gene: 89054565

Centisome position: 48.21

GC content: 58.84

Gene sequence:

>690_bases
ATGAAGCGTTTAGTATTGGCCGCAGTAATGAGTATTGGGGCGGCGGCAGCGGCGCAGGCAGCGCCTGTTTTGGGCCTTAG
CGATGTAACGAACAATGGTGGCGGCTCTTATACCTTCACCTTCGACAGCGTCGGCGGCGACATTGTCGGCACCGGCGACG
GCTTGTCTTTCAGTGGCGGCGGCATTTCGTTTCTGGCCTCCGCCAATGGCGGCCGAGTGATCCAGGATGCGCCTGCAAAT
GGCGGCCTTGGTATTCTTGGCAACAATGGCGGGTCAGATAACCTGGAAATTTCCCTCGGTGAAATACTCACCCTGACATT
CGGCCAATCGGTCAATATCCTGAACTTCACGCTCAACGGCCTGCGGAATGGAAACGGTCACCAGGATGCTGCGGACGGTT
CTTTGGGAGTGTCGGCCGACGGTCAACAATTCATTGGAAACGCCGAAAATTTTGATGGCGTGGCTCCGGACACCGTCCCA
GTGGGCGTCGCAAGCATTTGTTCCGTAAATCCCGCGTTCTGTTCGGTGTCTAGTCTGGCATTCCTTGCGGACCCCGCCGG
CGATGACTTCAAAGGCTATCTGGAGTCGATCACGGTCGAGCTTGCTCCAGTGCCGCTTCCCGCGTCGCTTGGCTTCCTCG
CGCTTGGCCTTGGAGGGCTGGCAGCGGTCCGTCGCCGCGCCCGTGCGTAA

Upstream 100 bases:

>100_bases
CTGTCCAAAAGAGCGGGTTTACAAAACGTTAATATCGTTTTTACTTGAAAAGCCTAATTTTTTGGTTTTTTGGAATTTGC
TTTGTTTGGGGAGTGTTGAA

Downstream 100 bases:

>100_bases
CGCACATCGACATGTCAGGTGACAGGACGACGCCCCCGGTTCGGGGGCGTTTTTCGTTGTGTGGCAGACCGGGACGCCTG
CCTCCCGCGATGGTGCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKRLVLAAVMSIGAAAAAQAAPVLGLSDVTNNGGGSYTFTFDSVGGDIVGTGDGLSFSGGGISFLASANGGRVIQDAPAN
GGLGILGNNGGSDNLEISLGEILTLTFGQSVNILNFTLNGLRNGNGHQDAADGSLGVSADGQQFIGNAENFDGVAPDTVP
VGVASICSVNPAFCSVSSLAFLADPAGDDFKGYLESITVELAPVPLPASLGFLALGLGGLAAVRRRARA

Sequences:

>Translated_229_residues
MKRLVLAAVMSIGAAAAAQAAPVLGLSDVTNNGGGSYTFTFDSVGGDIVGTGDGLSFSGGGISFLASANGGRVIQDAPAN
GGLGILGNNGGSDNLEISLGEILTLTFGQSVNILNFTLNGLRNGNGHQDAADGSLGVSADGQQFIGNAENFDGVAPDTVP
VGVASICSVNPAFCSVSSLAFLADPAGDDFKGYLESITVELAPVPLPASLGFLALGLGGLAAVRRRARA
>Mature_229_residues
MKRLVLAAVMSIGAAAAAQAAPVLGLSDVTNNGGGSYTFTFDSVGGDIVGTGDGLSFSGGGISFLASANGGRVIQDAPAN
GGLGILGNNGGSDNLEISLGEILTLTFGQSVNILNFTLNGLRNGNGHQDAADGSLGVSADGQQFIGNAENFDGVAPDTVP
VGVASICSVNPAFCSVSSLAFLADPAGDDFKGYLESITVELAPVPLPASLGFLALGLGGLAAVRRRARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22601; Mature: 22601

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVLAAVMSIGAAAAAQAAPVLGLSDVTNNGGGSYTFTFDSVGGDIVGTGDGLSFSGG
CCHHHHHHHHHHHHHHHHHHCCCEECHHCCCCCCCEEEEEEECCCCCEEECCCCCEECCC
GISFLASANGGRVIQDAPANGGLGILGNNGGSDNLEISLGEILTLTFGQSVNILNFTLNG
CEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCEEEEECEEEEEECCCCCEEEEEEEEC
LRNGNGHQDAADGSLGVSADGQQFIGNAENFDGVAPDTVPVGVASICSVNPAFCSVSSLA
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHEE
FLADPAGDDFKGYLESITVELAPVPLPASLGFLALGLGGLAAVRRRARA
EEECCCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLVLAAVMSIGAAAAAQAAPVLGLSDVTNNGGGSYTFTFDSVGGDIVGTGDGLSFSGG
CCHHHHHHHHHHHHHHHHHHCCCEECHHCCCCCCCEEEEEEECCCCCEEECCCCCEECCC
GISFLASANGGRVIQDAPANGGLGILGNNGGSDNLEISLGEILTLTFGQSVNILNFTLNG
CEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCEEEEECEEEEEECCCCCEEEEEEEEC
LRNGNGHQDAADGSLGVSADGQQFIGNAENFDGVAPDTVPVGVASICSVNPAFCSVSSLA
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHEE
FLADPAGDDFKGYLESITVELAPVPLPASLGFLALGLGGLAAVRRRARA
EEECCCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA