Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054338

Identifier: 89054338

GI number: 89054338

Start: 1834795

End: 1835034

Strand: Direct

Name: 89054338

Synonym: Jann_1847

Alternate gene names: NA

Gene position: 1834795-1835034 (Clockwise)

Preceding gene: 89054337

Following gene: 89054339

Centisome position: 42.49

GC content: 54.58

Gene sequence:

>240_bases
ATGTCCAACACGCCCCATGAACTGGCCGAAGATTTCCCCGAGCATGTCGACAAAATGCATGAATTGCGCGGCTCGGACGC
GCATTTCGCAAAGCTGTTCGATGCCTATCATGTGGCCAACCGCGCCACCCATCGCGCAGAAACCGATGTGGAGCCGACAA
CGGATGACCATCTGACGGAATTGCGCAAGGAGAGGATGCGGTTGAAAGATGAGATCTACGGTTATCTGACGAAAGCCTGA

Upstream 100 bases:

>100_bases
TCGTGCTGCACGCAACGCCCGTGGTCCAGAACGCTGACCACATCCTGGCGTCCTCGCTTCACCCCGATAGCCGCAAGCGC
TGAAAAGACAGGAGACACAT

Downstream 100 bases:

>100_bases
TCGTGAATTTCTTGAGTGTGGCGGGGTTTTCCGGCACGCTCTCCCCCAAAAGGCCCGCGCGCTGTTTGTGGGTGTATTAT
GGGGGGCCCAAGCGTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSNTPHELAEDFPEHVDKMHELRGSDAHFAKLFDAYHVANRATHRAETDVEPTTDDHLTELRKERMRLKDEIYGYLTKA

Sequences:

>Translated_79_residues
MSNTPHELAEDFPEHVDKMHELRGSDAHFAKLFDAYHVANRATHRAETDVEPTTDDHLTELRKERMRLKDEIYGYLTKA
>Mature_78_residues
SNTPHELAEDFPEHVDKMHELRGSDAHFAKLFDAYHVANRATHRAETDVEPTTDDHLTELRKERMRLKDEIYGYLTKA

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9250; Mature: 9119

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTPHELAEDFPEHVDKMHELRGSDAHFAKLFDAYHVANRATHRAETDVEPTTDDHLTE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LRKERMRLKDEIYGYLTKA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNTPHELAEDFPEHVDKMHELRGSDAHFAKLFDAYHVANRATHRAETDVEPTTDDHLTE
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LRKERMRLKDEIYGYLTKA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA