| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054281
Identifier: 89054281
GI number: 89054281
Start: 1776722
End: 1777444
Strand: Direct
Name: 89054281
Synonym: Jann_1790
Alternate gene names: NA
Gene position: 1776722-1777444 (Clockwise)
Preceding gene: 89054280
Following gene: 89054284
Centisome position: 41.15
GC content: 65.98
Gene sequence:
>723_bases ATGTCGCCCACATCCAACCCAGTCGCCGACCTTCTGGCAAAACACGCCGCCCCCGATCTGGTGGGCGGCACCATACTGCC GTCCGTGTCCGCGCGGCCCTTTGTGGCGGACTACGGCGTGGGCAAGCCCGGCTCCGGGCGGCTGACCGGCGCGATGATAC CGCTGATCATCGGCGCGGTCCTGATCCTGGTGTCGGTGATCGTTGCGGCCAACGCGCTGAGGGCGGGGGAGGTGACGATG AATTCCGGCATGGGCATTGCGTTGCCGCTGTTCATCGCGGCGTTCGTCGCGGGGCCTGCGGTGGTCAAGGCCAAAGAGGG CACTTTGCAATGGCGGCGCGTGGCCGAAATCCATGCCGACAAGGTGGTGGTGGCGGATCGGGTCGGCGATCAAACGGCCG CATGGATTGCGCCGATCTCGGAGTATCGCGACGTGCACCAGAGCTTCATGTATATCCCGTCGCCCGACGGAGACGGCAGC GGGCTGGAGCTTGAGGTCGTGCTGCTGCGCCACCCGGATCCCGCGAAAACGATCTACGTTAGCGGCACGCGCAAGCAGAA TATGGGCGGCATGAGCTTCATGGATATGGTCCAGGCCGGACGGGAGGGGCGCAAGGACGAGGTCGTGGCCGCCACCGGCG ATACCCGCAACCCAGCGGTCGAAGCGCTCGTGGCCGCTTTGGTGGAAGAGACGGGCCTGCCGCTGGTGCAGGACTTCGAT TGA
Upstream 100 bases:
>100_bases TCTGCGCAATGTGGCGGCGCCCTAGGGTCGGGTTTTCCGTATTGGGCAGGCTGCGGGGCGTCCGCTATAATCCTGATCAT CCACAAGATTTTGAGGTCCC
Downstream 100 bases:
>100_bases GGAAAGGCGTCGTCGCAGGCGCGGTCCGGATGCGGCGTCGGGCGCGCTCCTCCCCCCTCCAAACAGGCGTCGGGCCGTTG GTTTCTGACCCGGGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSPTSNPVADLLAKHAAPDLVGGTILPSVSARPFVADYGVGKPGSGRLTGAMIPLIIGAVLILVSVIVAANALRAGEVTM NSGMGIALPLFIAAFVAGPAVVKAKEGTLQWRRVAEIHADKVVVADRVGDQTAAWIAPISEYRDVHQSFMYIPSPDGDGS GLELEVVLLRHPDPAKTIYVSGTRKQNMGGMSFMDMVQAGREGRKDEVVAATGDTRNPAVEALVAALVEETGLPLVQDFD
Sequences:
>Translated_240_residues MSPTSNPVADLLAKHAAPDLVGGTILPSVSARPFVADYGVGKPGSGRLTGAMIPLIIGAVLILVSVIVAANALRAGEVTM NSGMGIALPLFIAAFVAGPAVVKAKEGTLQWRRVAEIHADKVVVADRVGDQTAAWIAPISEYRDVHQSFMYIPSPDGDGS GLELEVVLLRHPDPAKTIYVSGTRKQNMGGMSFMDMVQAGREGRKDEVVAATGDTRNPAVEALVAALVEETGLPLVQDFD >Mature_239_residues SPTSNPVADLLAKHAAPDLVGGTILPSVSARPFVADYGVGKPGSGRLTGAMIPLIIGAVLILVSVIVAANALRAGEVTMN SGMGIALPLFIAAFVAGPAVVKAKEGTLQWRRVAEIHADKVVVADRVGDQTAAWIAPISEYRDVHQSFMYIPSPDGDGSG LELEVVLLRHPDPAKTIYVSGTRKQNMGGMSFMDMVQAGREGRKDEVVAATGDTRNPAVEALVAALVEETGLPLVQDFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25092; Mature: 24961
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTSNPVADLLAKHAAPDLVGGTILPSVSARPFVADYGVGKPGSGRLTGAMIPLIIGAV CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH LILVSVIVAANALRAGEVTMNSGMGIALPLFIAAFVAGPAVVKAKEGTLQWRRVAEIHAD HHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCC KVVVADRVGDQTAAWIAPISEYRDVHQSFMYIPSPDGDGSGLELEVVLLRHPDPAKTIYV EEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCCCCEEEE SGTRKQNMGGMSFMDMVQAGREGRKDEVVAATGDTRNPAVEALVAALVEETGLPLVQDFD ECCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure SPTSNPVADLLAKHAAPDLVGGTILPSVSARPFVADYGVGKPGSGRLTGAMIPLIIGAV CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH LILVSVIVAANALRAGEVTMNSGMGIALPLFIAAFVAGPAVVKAKEGTLQWRRVAEIHAD HHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCC KVVVADRVGDQTAAWIAPISEYRDVHQSFMYIPSPDGDGSGLELEVVLLRHPDPAKTIYV EEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCCCCEEEE SGTRKQNMGGMSFMDMVQAGREGRKDEVVAATGDTRNPAVEALVAALVEETGLPLVQDFD ECCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA