| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054237
Identifier: 89054237
GI number: 89054237
Start: 1737842
End: 1738108
Strand: Direct
Name: 89054237
Synonym: Jann_1746
Alternate gene names: NA
Gene position: 1737842-1738108 (Clockwise)
Preceding gene: 89054236
Following gene: 89054238
Centisome position: 40.25
GC content: 60.3
Gene sequence:
>267_bases GTGATTATTACGTTTATTCTCGGGGCTTTGGCCGGATTGGCGACCCCTTATCTGGAGCCGCATATGCGCCGCGCGATGGA GCAGGTGGCCCTCGCCAAAATCCGGATCAGCGAGACGGAGTTTGATCTGCTGACGCTGGTCCTGTTGTTGCTGGTCGCGG CTTTGGTGACAGGCGGCGGCTCGTCACTGGCGCTTCTGACGGGCGCGTTGTTGGGCGTTTTTGGTAAGCGATTGCTGGCT CTGGCCCAGGGAAGGACCGGCGAATGA
Upstream 100 bases:
>100_bases TTTCCCGATGGCACGAAACTGGTGACCGTGCATCACCCTATAAGATGAGGGCTCATTTAATGATGAACAATTCGGGGACG ACGGATTCGGGGGCAGCGCC
Downstream 100 bases:
>100_bases TCCCCGGCGAAGTAATGCCTGCGGACGGCACGATTGAACTGAATGCAGGGGCCCAGGCCGTAACGCTGGAGGTTTCCAAC ACCGGCGACAGGCCCATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MIITFILGALAGLATPYLEPHMRRAMEQVALAKIRISETEFDLLTLVLLLLVAALVTGGGSSLALLTGALLGVFGKRLLA LAQGRTGE
Sequences:
>Translated_88_residues MIITFILGALAGLATPYLEPHMRRAMEQVALAKIRISETEFDLLTLVLLLLVAALVTGGGSSLALLTGALLGVFGKRLLA LAQGRTGE >Mature_88_residues MIITFILGALAGLATPYLEPHMRRAMEQVALAKIRISETEFDLLTLVLLLLVAALVTGGGSSLALLTGALLGVFGKRLLA LAQGRTGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9232; Mature: 9232
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITFILGALAGLATPYLEPHMRRAMEQVALAKIRISETEFDLLTLVLLLLVAALVTGGG CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC SSLALLTGALLGVFGKRLLALAQGRTGE CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIITFILGALAGLATPYLEPHMRRAMEQVALAKIRISETEFDLLTLVLLLLVAALVTGGG CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC SSLALLTGALLGVFGKRLLALAQGRTGE CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA