Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054204

Identifier: 89054204

GI number: 89054204

Start: 1694956

End: 1696488

Strand: Direct

Name: 89054204

Synonym: Jann_1713

Alternate gene names: NA

Gene position: 1694956-1696488 (Clockwise)

Preceding gene: 89054201

Following gene: 89054207

Centisome position: 39.25

GC content: 63.27

Gene sequence:

>1533_bases
ATGAAGACGATGAAACTGGCCGCGGCGCTTGCGGTGGGAACGATTTTGACAAGCGGCACGGCATGGGCGCAGGACATCAT
CGAATTTAACGGGACCAATCTGGGGAGCGAACAAGCGAACGTTCACCGAAATGTCGGCCAATCCTTTGTCATCTCCGAAG
CTCGTAGACTGGACACATTCGTTCTAAGGAATCAAACCGGCAACCAGAGTACTGGAAGCTTTGATGTCGAAGTTCGCCAA
CTCAACGGGTTGGTCGCATCAAGCCAGGCGTTGTTCACGCGTTCGCTGCCGGCCGAAATCCGCAACGGTGACGTCACAAT
CAGTGGTATCAACACAATTCTGCCGAGCGCAGGCACATATATAATTATTTTGGCAAATGCGTCGGGCTCTGTGATTTGGG
CTGGTGAAGGTGGGCCTCGTTTCCCCGACGGAGATGCTTTGGCGGCAAATCCGTCCACTCCTTTGATGTTTGATACGTCG
CCAGGCGGGGACTTCTATTTTACGCTGAACTTCTCGAATGTTGGACCCACACCAGAGGAACTCGCCGCCCTCGTCGCCGC
CGAGCAGGCGCGCCTTGCGGCTGCGGCCGCTGCGCAGGAGGCCGCAGAGGTCAACGCGTTCGCCCAAAGTTCAGCGGCCA
CCGGCACCTCTGCTCGCCTGCTGGTGATCGGCGCGGACGGCGTGGTGCGCGATGCGGGGCAGGTCTCGCTGGCCACCCGC
GACAACCAGCTGGTGCTGACCCGTGTGGCGGGCAGCAGCGATGTGACCGCCTCGACCTCCGGCGCGCCCGGCATGATGGG
CGGCGTCTATACCTGGGTCGAGATCACGGGCTTTACCTCCGACACGTTCGGCTCCGGCGACGGCTCGGTCACTGGGCGCG
GCTTGCAGATCGGGGCCGATATGGCCATCGGGCCGGACATGGTCGCGGGCCTGTCACTGGGCTATTCGACGGTCGAGACC
GGCGATACGGGCATCAGCACCGAGGGCACCTACACCTACCTCCAGCCCTATTTCGCCTACCGCTCCGGCGCATGGGCGGG
CAATGCCAGCCTGATCTACGGCGTGGGCGATATCGAGCAGACGTCCACCGCAGGCACCGGTGAGGCGGATGTCACCTTCA
CCGCGCTCACCTTCGAGGGCGGCTATGATTACGCCCTGAGCGACGCGCTGACCGTGACGCCGACCGTGGGCCTCGTCTAT
GGCCGGGAGCAGACGGAGGGGACGTCGGGCATCCTTGCGGGGCGCGACAGCGACGTGACCTTCGGCCAGGTCTCCCTGGG
CGCGCGGATGACCTATGCGACGGATGCGGGGACGCTCTTTGCGGGGCTCCACGCCGAGTATCTGTCCAACGAGACCGAAT
TTGATCTGGCGCAGGATTTTCTGGCCGATGACGGCTGGACAGGTCGCCTGGAACTGGGCGCGGACATGGCGCTGTCGGGT
GGTCTGGACCTGAGCACGTCGGTCGAATTGTCCGGCCTCGGCGGCGACATGCAGACCGTGTCGGGCGCGCTGCGGGTGGC
GTTCCGGTTCTGA

Upstream 100 bases:

>100_bases
AGCGCCCGTTAAGTGCTGGTCATCGCCTGATAATTTCTGGCTTACCTGACGTCATGAGTAGTATGCGGTTCGCCCGGCGA
CCGGCAAAAGGATGTGACGG

Downstream 100 bases:

>100_bases
TCAAAAAGGTTAACGGTGGGGGTCGTTAACCTTTTTGTCGTTTTGCTGTAAGTGGTTAAGTCCTTGCTCAACCTTGAGCA
CGGGGCGTGAGCGCGCGTTT

Product: autotransporter beta-domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKTMKLAAALAVGTILTSGTAWAQDIIEFNGTNLGSEQANVHRNVGQSFVISEARRLDTFVLRNQTGNQSTGSFDVEVRQ
LNGLVASSQALFTRSLPAEIRNGDVTISGINTILPSAGTYIIILANASGSVIWAGEGGPRFPDGDALAANPSTPLMFDTS
PGGDFYFTLNFSNVGPTPEELAALVAAEQARLAAAAAAQEAAEVNAFAQSSAATGTSARLLVIGADGVVRDAGQVSLATR
DNQLVLTRVAGSSDVTASTSGAPGMMGGVYTWVEITGFTSDTFGSGDGSVTGRGLQIGADMAIGPDMVAGLSLGYSTVET
GDTGISTEGTYTYLQPYFAYRSGAWAGNASLIYGVGDIEQTSTAGTGEADVTFTALTFEGGYDYALSDALTVTPTVGLVY
GREQTEGTSGILAGRDSDVTFGQVSLGARMTYATDAGTLFAGLHAEYLSNETEFDLAQDFLADDGWTGRLELGADMALSG
GLDLSTSVELSGLGGDMQTVSGALRVAFRF

Sequences:

>Translated_510_residues
MKTMKLAAALAVGTILTSGTAWAQDIIEFNGTNLGSEQANVHRNVGQSFVISEARRLDTFVLRNQTGNQSTGSFDVEVRQ
LNGLVASSQALFTRSLPAEIRNGDVTISGINTILPSAGTYIIILANASGSVIWAGEGGPRFPDGDALAANPSTPLMFDTS
PGGDFYFTLNFSNVGPTPEELAALVAAEQARLAAAAAAQEAAEVNAFAQSSAATGTSARLLVIGADGVVRDAGQVSLATR
DNQLVLTRVAGSSDVTASTSGAPGMMGGVYTWVEITGFTSDTFGSGDGSVTGRGLQIGADMAIGPDMVAGLSLGYSTVET
GDTGISTEGTYTYLQPYFAYRSGAWAGNASLIYGVGDIEQTSTAGTGEADVTFTALTFEGGYDYALSDALTVTPTVGLVY
GREQTEGTSGILAGRDSDVTFGQVSLGARMTYATDAGTLFAGLHAEYLSNETEFDLAQDFLADDGWTGRLELGADMALSG
GLDLSTSVELSGLGGDMQTVSGALRVAFRF
>Mature_510_residues
MKTMKLAAALAVGTILTSGTAWAQDIIEFNGTNLGSEQANVHRNVGQSFVISEARRLDTFVLRNQTGNQSTGSFDVEVRQ
LNGLVASSQALFTRSLPAEIRNGDVTISGINTILPSAGTYIIILANASGSVIWAGEGGPRFPDGDALAANPSTPLMFDTS
PGGDFYFTLNFSNVGPTPEELAALVAAEQARLAAAAAAQEAAEVNAFAQSSAATGTSARLLVIGADGVVRDAGQVSLATR
DNQLVLTRVAGSSDVTASTSGAPGMMGGVYTWVEITGFTSDTFGSGDGSVTGRGLQIGADMAIGPDMVAGLSLGYSTVET
GDTGISTEGTYTYLQPYFAYRSGAWAGNASLIYGVGDIEQTSTAGTGEADVTFTALTFEGGYDYALSDALTVTPTVGLVY
GREQTEGTSGILAGRDSDVTFGQVSLGARMTYATDAGTLFAGLHAEYLSNETEFDLAQDFLADDGWTGRLELGADMALSG
GLDLSTSVELSGLGGDMQTVSGALRVAFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52464; Mature: 52464

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMKLAAALAVGTILTSGTAWAQDIIEFNGTNLGSEQANVHRNVGQSFVISEARRLDTF
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHEEE
VLRNQTGNQSTGSFDVEVRQLNGLVASSQALFTRSLPAEIRNGDVTISGINTILPSAGTY
EEECCCCCCCCCEEEEEEEECCCEEECCCHHEEECCCHHHCCCCEEEEEHHHHCCCCCCE
IIILANASGSVIWAGEGGPRFPDGDALAANPSTPLMFDTSPGGDFYFTLNFSNVGPTPEE
EEEEECCCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCCCCCEEEEEEECCCCCCHHH
LAALVAAEQARLAAAAAAQEAAEVNAFAQSSAATGTSARLLVIGADGVVRDAGQVSLATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCEEEEEC
DNQLVLTRVAGSSDVTASTSGAPGMMGGVYTWVEITGFTSDTFGSGDGSVTGRGLQIGAD
CCEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCEEECCC
MAIGPDMVAGLSLGYSTVETGDTGISTEGTYTYLQPYFAYRSGAWAGNASLIYGVGDIEQ
CCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEECHHHHHCCCCCCCCCEEEEECCCCCC
TSTAGTGEADVTFTALTFEGGYDYALSDALTVTPTVGLVYGREQTEGTSGILAGRDSDVT
CCCCCCCCCCEEEEEEEECCCCCEEECCCEEECCEEEEEECCCCCCCCCCEEECCCCCCE
FGQVSLGARMTYATDAGTLFAGLHAEYLSNETEFDLAQDFLADDGWTGRLELGADMALSG
EEEEECCEEEEEECCCCCEEHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCEEECC
GLDLSTSVELSGLGGDMQTVSGALRVAFRF
CCCCCCEEEEECCCCCHHHHCCEEEEEEEC
>Mature Secondary Structure
MKTMKLAAALAVGTILTSGTAWAQDIIEFNGTNLGSEQANVHRNVGQSFVISEARRLDTF
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHEEE
VLRNQTGNQSTGSFDVEVRQLNGLVASSQALFTRSLPAEIRNGDVTISGINTILPSAGTY
EEECCCCCCCCCEEEEEEEECCCEEECCCHHEEECCCHHHCCCCEEEEEHHHHCCCCCCE
IIILANASGSVIWAGEGGPRFPDGDALAANPSTPLMFDTSPGGDFYFTLNFSNVGPTPEE
EEEEECCCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCCCCCEEEEEEECCCCCCHHH
LAALVAAEQARLAAAAAAQEAAEVNAFAQSSAATGTSARLLVIGADGVVRDAGQVSLATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCEEEEEC
DNQLVLTRVAGSSDVTASTSGAPGMMGGVYTWVEITGFTSDTFGSGDGSVTGRGLQIGAD
CCEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEECCCEEECCC
MAIGPDMVAGLSLGYSTVETGDTGISTEGTYTYLQPYFAYRSGAWAGNASLIYGVGDIEQ
CCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEECHHHHHCCCCCCCCCEEEEECCCCCC
TSTAGTGEADVTFTALTFEGGYDYALSDALTVTPTVGLVYGREQTEGTSGILAGRDSDVT
CCCCCCCCCCEEEEEEEECCCCCEEECCCEEECCEEEEEECCCCCCCCCCEEECCCCCCE
FGQVSLGARMTYATDAGTLFAGLHAEYLSNETEFDLAQDFLADDGWTGRLELGADMALSG
EEEEECCEEEEEECCCCCEEHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCEEECC
GLDLSTSVELSGLGGDMQTVSGALRVAFRF
CCCCCCEEEEECCCCCHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA