Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054142

Identifier: 89054142

GI number: 89054142

Start: 1637185

End: 1637439

Strand: Reverse

Name: 89054142

Synonym: Jann_1651

Alternate gene names: NA

Gene position: 1637439-1637185 (Counterclockwise)

Preceding gene: 89054143

Following gene: 89054141

Centisome position: 37.92

GC content: 58.82

Gene sequence:

>255_bases
TTGAGTGCAAATCACCGGACGGCACGCCCGCGCAAGATCCTGTTCCTACTGATCTACCTGGCCCTCACGGGGGTGTTTTC
GTTCGCCTATTACCTCCAGTATTACCGCCATCTGGACTGCTTTAATGAGCTTGGGCGTTGCTACGATCCCGATATTGGGT
TCGTGTATACGGAAAGCGGCATGGTCTGGGGCGTCGTCGCCGCCGTTTTCGCCAGTCTTGCGGGCCTGTCCGTCTGGCGA
TTGCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
ATGCCCCCGCGGCGGAGTTGCAGATCAAAAGCCTGCCGGATGTGCCTGACGGGTATGAGATCGCCAAGGTGGACGTCGTG
ATCCGCCTGCGCGAGAAGAC

Downstream 100 bases:

>100_bases
TGCGGAGGCATTAATGGCGTTAATCAACCGGCACGTCATCGGCCTTTTGCACGGCGCATGGCGCAGATGCGCGATATGGC
CCTAGCCATTCGGGGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MSANHRTARPRKILFLLIYLALTGVFSFAYYLQYYRHLDCFNELGRCYDPDIGFVYTESGMVWGVVAAVFASLAGLSVWR
LRRR

Sequences:

>Translated_84_residues
MSANHRTARPRKILFLLIYLALTGVFSFAYYLQYYRHLDCFNELGRCYDPDIGFVYTESGMVWGVVAAVFASLAGLSVWR
LRRR
>Mature_83_residues
SANHRTARPRKILFLLIYLALTGVFSFAYYLQYYRHLDCFNELGRCYDPDIGFVYTESGMVWGVVAAVFASLAGLSVWRL
RRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9775; Mature: 9643

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANHRTARPRKILFLLIYLALTGVFSFAYYLQYYRHLDCFNELGRCYDPDIGFVYTESG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
MVWGVVAAVFASLAGLSVWRLRRR
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SANHRTARPRKILFLLIYLALTGVFSFAYYLQYYRHLDCFNELGRCYDPDIGFVYTESG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
MVWGVVAAVFASLAGLSVWRLRRR
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA