Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054116

Identifier: 89054116

GI number: 89054116

Start: 1612493

End: 1612906

Strand: Direct

Name: 89054116

Synonym: Jann_1625

Alternate gene names: NA

Gene position: 1612493-1612906 (Clockwise)

Preceding gene: 89054115

Following gene: 89054117

Centisome position: 37.34

GC content: 63.04

Gene sequence:

>414_bases
ATGAGTTTTGAGGAGGCCCTGGCCTTGCAACCCACCTGGGTGCAGATCTGGTTGAATGTCCTGCTGTTCGGCGCGTTCAT
CCTGCCGCTGAGTTTCCTGATCTGGCGGCAGAGCCGGTTGGCAGGGGCGGTGACGGTGGTGACCTCCGTCGTTGCGGGGC
TGGCGATCACGTGGATGTATGCGCAGATGGGCTATGTGAAGCTGCTGGGCCTGCCGCATGTCGTGCTATGGACCCCGTTG
GCCCTTTTCCTATGGCGGCAGATCCGGCGTGTGGACATGCCCGTCTGGCCGCGCCGCCTGATGTCGGTGTCGCTGGTCAT
CATAGGGATCTCGCTGGCGTTTGATTACGTTGATGTGGCGCGGTGGGTGTTGGGCGAGAGGGCGGCCATGGCGGGCACGC
TGCCGACAGACTAA

Upstream 100 bases:

>100_bases
AGGCGCTCTCGGGCATGGTCAAACGCATCGACCGGGCGGTGACGCCCCACGCGGTGGGCACGCCGGAGGATGTGACGAAG
GCCGTTGAGGCGCTGGCCCG

Downstream 100 bases:

>100_bases
AGACAGAGAAGGAGCGGTGACATGTTTGATCTGACAGGGAAAAATGCGCTGGTGACGGGGGCGTCGGGCGGGATTGGCGC
GGCGATTGCGCGGCAGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMYAQMGYVKLLGLPHVVLWTPL
ALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVARWVLGERAAMAGTLPTD

Sequences:

>Translated_137_residues
MSFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMYAQMGYVKLLGLPHVVLWTPL
ALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVARWVLGERAAMAGTLPTD
>Mature_136_residues
SFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMYAQMGYVKLLGLPHVVLWTPLA
LFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVARWVLGERAAMAGTLPTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15470; Mature: 15339

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMY
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMGYVKLLGLPHVVLWTPLALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RWVLGERAAMAGTLPTD
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMY
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMGYVKLLGLPHVVLWTPLALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RWVLGERAAMAGTLPTD
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA