| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054116
Identifier: 89054116
GI number: 89054116
Start: 1612493
End: 1612906
Strand: Direct
Name: 89054116
Synonym: Jann_1625
Alternate gene names: NA
Gene position: 1612493-1612906 (Clockwise)
Preceding gene: 89054115
Following gene: 89054117
Centisome position: 37.34
GC content: 63.04
Gene sequence:
>414_bases ATGAGTTTTGAGGAGGCCCTGGCCTTGCAACCCACCTGGGTGCAGATCTGGTTGAATGTCCTGCTGTTCGGCGCGTTCAT CCTGCCGCTGAGTTTCCTGATCTGGCGGCAGAGCCGGTTGGCAGGGGCGGTGACGGTGGTGACCTCCGTCGTTGCGGGGC TGGCGATCACGTGGATGTATGCGCAGATGGGCTATGTGAAGCTGCTGGGCCTGCCGCATGTCGTGCTATGGACCCCGTTG GCCCTTTTCCTATGGCGGCAGATCCGGCGTGTGGACATGCCCGTCTGGCCGCGCCGCCTGATGTCGGTGTCGCTGGTCAT CATAGGGATCTCGCTGGCGTTTGATTACGTTGATGTGGCGCGGTGGGTGTTGGGCGAGAGGGCGGCCATGGCGGGCACGC TGCCGACAGACTAA
Upstream 100 bases:
>100_bases AGGCGCTCTCGGGCATGGTCAAACGCATCGACCGGGCGGTGACGCCCCACGCGGTGGGCACGCCGGAGGATGTGACGAAG GCCGTTGAGGCGCTGGCCCG
Downstream 100 bases:
>100_bases AGACAGAGAAGGAGCGGTGACATGTTTGATCTGACAGGGAAAAATGCGCTGGTGACGGGGGCGTCGGGCGGGATTGGCGC GGCGATTGCGCGGCAGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMYAQMGYVKLLGLPHVVLWTPL ALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVARWVLGERAAMAGTLPTD
Sequences:
>Translated_137_residues MSFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMYAQMGYVKLLGLPHVVLWTPL ALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVARWVLGERAAMAGTLPTD >Mature_136_residues SFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMYAQMGYVKLLGLPHVVLWTPLA LFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVARWVLGERAAMAGTLPTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15470; Mature: 15339
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMY CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQMGYVKLLGLPHVVLWTPLALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RWVLGERAAMAGTLPTD HHHHHHHHHHCCCCCCC >Mature Secondary Structure SFEEALALQPTWVQIWLNVLLFGAFILPLSFLIWRQSRLAGAVTVVTSVVAGLAITWMY CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQMGYVKLLGLPHVVLWTPLALFLWRQIRRVDMPVWPRRLMSVSLVIIGISLAFDYVDVA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RWVLGERAAMAGTLPTD HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA