| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054108
Identifier: 89054108
GI number: 89054108
Start: 1606318
End: 1606773
Strand: Direct
Name: 89054108
Synonym: Jann_1617
Alternate gene names: NA
Gene position: 1606318-1606773 (Clockwise)
Preceding gene: 89054107
Following gene: 89054109
Centisome position: 37.2
GC content: 60.75
Gene sequence:
>456_bases ATGAAAAAGCTTGTCGCCGCCGCCTTTGCCCTGATCGCCACTGCGGGCATCGCCGCCGCGTGTCCCGCCTACCAGAATGC AGGCGTTCAATCGGGCTACACCACGGGTCAGGACCTGTGGACACCCAACAGCTACTCGGTCACGGCCGGTGGCAGCCAGA ACCTGCGCAATTGCGGGTTCAACCATTCGGGCTACGTGATCTCGCGTCCTGACTTTGAATTCCGCATCGACGGTTTGGAA AGCTACCGCCGCCTGGAGATCCGCGTGAACGGGTCCTGCGACACGGTTCTGCTGGTCAATGATGCGACGGGCAACTGGTA CTTCAACGACGATGGCTGGGGCAACCTGAACCCGCTGCTGAACGTGCACAACCCGCGCTCGGGCGTCTATGACATCTGGG TTGGCACCTATGGCCAGAACCTGTGTGGCGCGACGCTTCAGATGGAAACCTTCTGA
Upstream 100 bases:
>100_bases TAGCGCAACACCAATTCACCGCGCTCGTCACACATGATCAACACGTCAGAAAATTTGAAGACAACCCCTTCTAAGACAAA GAAAATTTGGAGTACCCAGT
Downstream 100 bases:
>100_bases TCTGACCGGTATCTTTCACGAATACGGCCCGCCTATACCGGCGGGCCGTTTTGCGTTTGGACGGGGGTGACGCTGGCCTA CGGGTTTTCGCCAAGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKKLVAAAFALIATAGIAAACPAYQNAGVQSGYTTGQDLWTPNSYSVTAGGSQNLRNCGFNHSGYVISRPDFEFRIDGLE SYRRLEIRVNGSCDTVLLVNDATGNWYFNDDGWGNLNPLLNVHNPRSGVYDIWVGTYGQNLCGATLQMETF
Sequences:
>Translated_151_residues MKKLVAAAFALIATAGIAAACPAYQNAGVQSGYTTGQDLWTPNSYSVTAGGSQNLRNCGFNHSGYVISRPDFEFRIDGLE SYRRLEIRVNGSCDTVLLVNDATGNWYFNDDGWGNLNPLLNVHNPRSGVYDIWVGTYGQNLCGATLQMETF >Mature_151_residues MKKLVAAAFALIATAGIAAACPAYQNAGVQSGYTTGQDLWTPNSYSVTAGGSQNLRNCGFNHSGYVISRPDFEFRIDGLE SYRRLEIRVNGSCDTVLLVNDATGNWYFNDDGWGNLNPLLNVHNPRSGVYDIWVGTYGQNLCGATLQMETF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16440; Mature: 16440
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVAAAFALIATAGIAAACPAYQNAGVQSGYTTGQDLWTPNSYSVTAGGSQNLRNCGF CCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCC NHSGYVISRPDFEFRIDGLESYRRLEIRVNGSCDTVLLVNDATGNWYFNDDGWGNLNPLL CCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCEE NVHNPRSGVYDIWVGTYGQNLCGATLQMETF EECCCCCCEEEEEEECCCCCCCCCEEEEECC >Mature Secondary Structure MKKLVAAAFALIATAGIAAACPAYQNAGVQSGYTTGQDLWTPNSYSVTAGGSQNLRNCGF CCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCC NHSGYVISRPDFEFRIDGLESYRRLEIRVNGSCDTVLLVNDATGNWYFNDDGWGNLNPLL CCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCEE NVHNPRSGVYDIWVGTYGQNLCGATLQMETF EECCCCCCEEEEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA